Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)
File reset events, by site
Site
Allocated
Outputting
CERN
122
0
ES_PIC
20
0
FR_CCIN2P3
13
0
UK_RAL-PPD
12
0
UK_RAL-Tier1
7
0
UK_Lancaster
2
0
UK_Bristol
2
0
UK_Oxford
1
0
Jobscript
#!/bin/bash
:<<'EOF'
To use this jobscript to process 10 files from the dc4-vd-coldbox-bottom
data and put the output in the usertests namespace (MetaCat) and
scope (Rucio), and in the usertests:output-test-01 dataset in MetaCat and
Rucio, use this command to create the workflow:
justin simple-workflow \
--mql \
"files from dune:all where core.run_type='dc4-vd-coldbox-bottom' and dune.campaign='dc4' limit 10" \
--jobscript dc4-vd-coldbox-bottom.jobscript --max-distance 30 --rss-mb 4000 \
--scope usertests --output-pattern '*_reco_data_*.root:output-test-01'
The following optional environment variables can be set when creating the
workflow/stage: FCL_FILE, NUM_EVENTS, DUNE_VERSION, DUNE_QUALIFIER
EOF
# fcl file and DUNE software version/qualifier to be used
FCL_FILE_1=my_standard_detsim_protodunehd.fcl
FCL_FILE_2=runSingleHit_and_OpReco_PDHD.fcl
DUNE_VERSION=${DUNE_VERSION:-v10_04_07d01}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
events_option="-n $NUM_EVENTS"
fi
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`
if [ "$did_pfn_rse" = "" ] ; then
echo "Nothing to process - exit jobscript"
exit 0
fi
# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt
# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"
# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
export PRODUCTS=$INPUT_TAR_DIR_LOCAL:${PRODUCTS}
echo "PRODUCTS: ${PRODUCTS}"
#echo "DUNESW_DIR: ${DUNESW_DIR}"
# Properly setup custom code with INPUT_TAR_DIR_LOCAL
#export DUNESW_DIR=${INPUT_TAR_DIR_LOCAL}/dunesw/${DUNE_VERSION}
#export DUNESW_FQ_DIR=${DUNESW_DIR}/slf7.x86_64.e26.prof
#export DUNESW_LIB=${DUNESW_FQ_DIR}/lib
export PROTODUNEANA_DIR=${INPUT_TAR_DIR_LOCAL}/protoduneana/${DUNE_VERSION}
export PROTODUNEANA_LIB=${PROTODUNEANA_DIR}/include
export PROTODUNEANA_FQ_DIR=${PROTODUNEANA_DIR}/slf7.x86_64.e26.prof
export PROTODUNEANA_LIB=${PROTODUNEANA_FQ_DIR}/lib
export DUNEOPDET_DIR=${INPUT_TAR_DIR_LOCAL}/duneopdet/${DUNE_VERSION}
export DUNEOPDET_LIB=${DUNEOPDET_DIR}/include
export DUNEOPDET_FQ_DIR=${DUNEOPDET_DIR}/slf7.x86_64.e26.prof
export DUNEOPDET_LIB=${DUNEOPDET_FQ_DIR}/lib
#export DUNEPROTOTYPES_DIR=${INPUT_TAR_DIR_LOCAL}/duneprototypes/${DUNE_VERSION}
#export DUNEPROTOTYPES_INC=${DUNEPROTOTYPES_DIR}/include
#export DUNEPROTOTYPES_FQ_DIR=${DUNEPROTOTYPES_DIR}/slf7.x86_64.e26.prof
#export DUNEPROTOTYPES_LIB=${DUNEPROTOTYPES_FQ_DIR}/lib
#export FHICL_FILE_PATH=${DUNESW_DIR}/fcl:${FHICL_FILE_PATH}
#export FHICL_FILE_PATH=${DUNEPROTOTYPES_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${PROTODUNEANA_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${DUNEOPDET_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${INPUT_TAR_DIR_LOCAL}/myfcl:${FHICL_FILE_PATH}
#echo "DUNESW_DIR: ${DUNESW_DIR}"
echo "PROTODUNEANA_DIR: ${PROTODUNEANA_DIR}"
#echo "DUNEPROTOTYPES_DIR: ${DUNEPROTOTYPES_DIR}"
echo "DUNEOPDET_DIR": ${DUNEOPDET_DIR}
source "${INPUT_TAR_DIR_LOCAL}/localProducts_larsoft_v10_04_07_e26_prof/setup2"
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
setup duneprototypes "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
echo " VERSION ACTIVE = VERSION ACTIVE = VERSION ACTIVE = "
ups active | grep "dunesw\|duneprototypes"
#mrsetenv
mrbslp
echo "now run lar on these files"
#$pfn
#cat file.list
#cat did.list
# Construct outFile from input $pfn
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`
outFile=output_tree_${fname}.root
outFile_2=output_art_${fname}.root
campaign="justIN.r${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"
LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so lar $events_option -c ${INPUT_TAR_DIR_LOCAL}/myfcl/$FCL_FILE_1 -o ${outFile_2} $pfn > log_singleHit_${now}.log 2>&1
# Do the scary preload stuff in a subshell!
LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so lar $events_option -c ${INPUT_TAR_DIR_LOCAL}/myfcl/$FCL_FILE_2 -o ${outFile_2} -T ${outFile} ${outFile_2} > output_log_singleHit_${now}.log 2>&1
# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"
echo "$pfn" > justin-processed-pfns.txt
#cat file.list > justin-processed-pfns.txt
echo "processed files"
#cat justin-processed-pfns.txt
ls -lRS
# Create compressed tar file with all log files
#tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
#exit $jobscriptExit
exit $larExit
justIN time: 2025-05-22 14:14:24 UTC justIN version: 01.03.01
