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21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.

Workflow 6847, Stage 1

Priority50
Processors1
Wall seconds28800
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs100.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1Rucio usertests:fdvd_optimistic_bg-w6847s1p1*reco2*.root7776000False

Environment variables

NameValue
INPUT_TAR_DIR_LOCAL/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/afd594708fa38ab8a6df9ea15688b101116ed4b9
NUM_EVENTS10

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
1000000009987013

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
2301700001023161325629607004
Files processed002002004004006006008008001000100012001200140014001600160018001800200020002200220024002400May-11 16:00May-11 19:00May-11 22:00May-12 01:00May-12 04:00May-12 07:00May-12 10:00May-12 13:00May-12 16:00May-12 19:00May-12 22:00May-13 01:00May-13 04:00May-13 07:00May-13 10:00May-13 13:00May-13 16:00May-13 19:00May-13 22:00May-14 01:00May-14 04:00May-14 07:00Files processedBin start timesNumber per binUS_FNAL-FermiG…US_FNAL-FermiGridUK_EdinburghFR_CCIN2P3US_WisconsinUS_ColoradoUK_BrunelUS_UChicagoES_PICUK_QMULUK_DurhamUK_ManchesterUK_OxfordUK_LancasterUK_RAL-Tier1UK_SheffieldUK_RAL-PPDCERNBR_CBPFUS_UConn-HPCUS_PuertoRicoUK_BristolUS_FNAL-T1

RSEs used

NameInputsOutputs
MONTECARLO199410
DUNE_US_FNAL_DISK_STAGE03739
DUNE_UK_MANCHESTER_CEPH01742
DUNE_IT_INFN_CNAF0994
RAL-PP0635
DUNE_CERN_EOS0356
DUNE_FR_CCIN2P3_DISK0173
DUNE_UK_LANCASTER_CEPH0115
RAL_ECHO083
QMUL043

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
US_FNAL-FermiGrid19922
UK_Manchester19773
ES_PIC17796
UK_RAL-PPD17370
CERN7190
UK_Sheffield6702
US_Wisconsin2082
US_UChicago1811
FR_CCIN2P31150
UK_Lancaster1040
UK_Edinburgh790
US_FNAL-T1586
UK_QMUL570
BR_CBPF530
US_Colorado440
UK_Durham350
UK_RAL-Tier1320
UK_Brunel260
US_UConn-HPC250
US_PuertoRico140
US_NotreDame100
UK_Oxford20
UK_Bristol20

Jobscript

#!/bin/bash
:<<'EOF'

To use this jobscript to process 5 files from the dataset fardet-hd__fd_mc_2023a_reco2__full-reconstructed__v09_81_00d02__standard_reco2_dune10kt_nu_1x2x6__prodgenie_nu_dune10kt_1x2x6__out1__validation
data and put the output in the $USER namespace (MetaCat) and saves the output in /scratch
Use this command to create the workflow:

justin simple-workflow \
--mql \
"files from fardet-hd:fardet-hd__fd_mc_2023a_reco2__full-reconstructed__v09_81_00d02__standard_reco2_dune10kt_nu_1x2x6__prodgenie_nu_dune10kt_1x2x6__out1__validation limit 5 ordered"\
--jobscript submit_ana.jobscript  --rss-mb 4000 \
--output-pattern '*_ana_*.root:$FNALURL/$USERF' 

The following optional environment variables can be set when creating the
workflow/stage: FCL_FILE, NUM_EVENTS, DUNE_VERSION, DUNE_QUALIFIER 

EOF

# fcl file and DUNE software version/qualifier to be used
FCL_FILE=${FCL_FILE:-$INPUT_TAR_DIR_LOCAL/prodmarley_nue_flat_cc_radiological_decay0_v3_6_vd_dune10kt_1x8x14_optimisticCavern.fcl}
DUNE_VERSION=${DUNE_VERSION:-v09_91_04d01}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}

export FHICL_FILE_PATH=${INPUT_TAR_DIR_LOCAL}:${FHICL_FILE_PATH}
export FW_SEARCH_PATH=${INPUT_TAR_DIR_LOCAL}:$FW_SEARCH_PATH

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`
outFile=fdvd_lowBg_reco2_${now}.root
outHistFile=reco_hist_${now}.root

campaign="justIN.w${JUSTIN_WORKFLOW_ID}s"

# Here is where the LArSoft command is call it (
(
# Do the scary preload stuff in a subshell!
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
echo "$LD_PRELOAD"

lar -c $FCL_FILE $events_option -o fdvd_gen.root > ${fname}_fdvd_${now}.log 2>&1 \
&& lar -c supernova_g4stage1_dunevd10kt_1x8x14_3view_30deg.fcl -n -1 -s fdvd_gen.root -o fdvd_g4Stage1.root > ${fname}_fdvd_g4Stage1_${now}.log 2>&1 \
&& lar -c standard_g4stage2_dunevd10kt_1x8x14_3view_30deg.fcl -n -1 -s fdvd_g4Stage1.root -o fdvd_g4Stage2.root > ${fname}_fdvd_g4Stage2_${now}.log 2>&1 \
&& lar -c standard_detsim_dunevd10kt_1x8x14_3view_30deg.fcl -n -1 -s fdvd_g4Stage2.root -o fdvd_detsim.root > ${fname}_fdvd_detsim_${now}.log 2>&1 \
&& lar -c standard_reco1_dunevd10kt_1x8x14_3view_30deg.fcl -n -1 -s fdvd_detsim.root -o fdvd_reco1.root > ${fname}_fdvd_reco1_${now}.log 2>&1 \
&& lar -c reco2_supernova_dunevd10kt_1x8x14_3view_30deg.fcl -n -1 -s fdvd_reco1.root -o fdvd_lowBg_reco2_${now}.root -T reco_hist_${now}.root > ${fname}_fdvd_reco2_${now}.log 2>&1
)

echo '=== Start last 100 lines of lar log file ==='
tail -100 ${fname}_reco2_${now}.log
echo '=== End last 100 lines of lar log file ==='

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"

if [ $larExit -eq 0 ] ; then
  # Success !
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  # Oh :(
  jobscriptExit=1
fi

# Create compressed tar file with all log files 
#tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $jobscriptExit
justIN time: 2025-08-14 17:46:13 UTC       justIN version: 01.03.02