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Workflow 6799, Stage 1

Priority50
Processors1
Wall seconds43200
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs30.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/imawby/hierarchyRecoVal_nutau_0/06799/1*HierarchyRecoPerformance*.root

Environment variables

NameValue
INPUT_TAR_DIR_LOCAL/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/248fe53f29624af7e0e2e711999585e5794743b4
NUM_EVENTS100

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
10000000966034

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
25620000234301521522300
Files processed0040408080120120160160200200240240280280320320360360May-09 15:00May-09 16:00May-09 17:00May-09 18:00May-09 19:00May-09 20:00Files processedBin start timesNumber per binUK_BristolFR_CCIN2P3US_UChicagoES_PICUK_SheffieldUS_WisconsinUK_LancasterUK_RAL-Tier1US_FNAL-FermiG…US_FNAL-FermiGridUK_QMULUK_DurhamUK_ManchesterUS_ColoradoUS_FNAL-T1
Replicas per RSE1000477.0195281453507196.994495223567161000309.93372720928664295.6529489502497183305.9111294329723155.4840468485354668331.71321860830477135.2746217473076653346.17712686884886128.7828216311631338357.6290908820872125.4445409462681332366.6610454225384123.8134767594916218373.1848794351411123.1561673211231216377.639327538387122.952708387898471379.86883952196985122.92508552363067Replicas per RSEDUNE_US_FNAL_DISK_S…DUNE_US_FNAL_DISK_STAGE (41%)FNAL_DCACHE (41%)RAL_ECHO (7%)RAL-PP (2%)NIKHEF (2%)DUNE_ES_PIC (1%)PRAGUE (1%)DUNE_UK_LANCASTER_C…DUNE_UK_LANCASTER_CEPH (0%)QMUL (0%)SURFSARA (0%)

RSEs used

NameInputsOutputs
DUNE_US_FNAL_DISK_STAGE7580
RAL_ECHO1960
RAL-PP710
PRAGUE410
NIKHEF400
DUNE_ES_PIC320
QMUL180
DUNE_UK_LANCASTER_CEPH160
SURFSARA10
None0966

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
US_UChicago371
US_FNAL-FermiGrid2416
UK_Manchester122
UK_Lancaster80
US_Colorado80
FR_CCIN2P361
ES_PIC60
US_Wisconsin62
UK_QMUL41
US_UConn-HPC40
UK_Sheffield27
UK_Brunel20
UK_RAL-Tier111
UK_Durham11

Jobscript

#!/bin/bash

# FCL file and DUNE software version/qualifier to be used
FCL_FILE=${FCL_FILE:-$INPUT_TAR_DIR_LOCAL/secondaryVertexing.fcl}
DUNE_VERSION=${DUNE_VERSION:-v10_04_07d01}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}

# Make sure that we're not beeing greedy with resources...
if [ -z ${JUSTIN_PROCESSORS} ]; then
 JUSTIN_PROCESSORS=1
fi

echo "Justin processors: ${JUSTIN_PROCESSORS}"

export TF_NUM_THREADS=${JUSTIN_PROCESSORS}
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS}
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS}
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS}
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS}
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}

# setup the DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
source $INPUT_TAR_DIR_LOCAL/setup-grid
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
mrbslp

export FW_SEARCH_PATH=.:${INPUT_TAR_DIR_LOCAL}:$FW_SEARCH_PATH
export FHICL_FILE_PATH=.:${INPUT_TAR_DIR_LOCAL}:$FHICL_FILE_PATH

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`

campaign="justIN.w${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

# Here is where the LArSoft command is call it 
(
# Do the scary preload stuff in a subshell!
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so

lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
)

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"

echo '=== Start last 100 lines of lar log file ==='
tail -100 ${fname}_reco_${now}.log
echo '=== End last 100 lines of lar log file ==='

mv HierarchyRecoPerformance.root HierarchyRecoPerformance_${fname}.root

if [ $larExit -eq 0 ] ; then
  # Success !
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  # Oh :(
  jobscriptExit=1
fi

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $jobscriptExit
justIN time: 2025-05-22 09:43:15 UTC       justIN version: 01.03.01