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Workflow 6725, Stage 1

Priority50
Processors1
Wall seconds43200
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs30.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Lancaster, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/imawby/hierarchyRecoVal_nu_0/06725/1*HierarchyRecoPerformance*.root

Environment variables

NameValue
INPUT_TAR_DIR_LOCAL/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/d8f5a79aa71fe7fc03873c703a7b9c2e4089490a
NUM_EVENTS100

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
10000965003500

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
1441000041011399000
Files processed004488121216162020242428283232May-08 17:00May-08 18:00May-08 19:00Files processedBin start timesNumber per binFR_CCIN2P3US_UChicagoES_PICUS_WisconsinUK_QMULUK_Manchester
Replicas per RSE1000478.91495889807953205.302155864189841000294.0383811204655275.710446316897750318.46951451702074143.94291369570648329.8335185350666136.3297369372531344341.35035764440744130.6477745512538341352.55538445253984126.7419321066604339363.45315065824155124.2955021087191535373.7183019063742123.121362362001864379.16190444480213122.92849200275281379.8603158357401122.92509700062219Replicas per RSEDUNE_US_FNAL_DISK_S…DUNE_US_FNAL_DISK_STAGE (44%)FNAL_DCACHE (44%)PRAGUE (2%)NIKHEF (2%)RAL-PP (1%)SURFSARA (1%)RAL_ECHO (1%)QMUL (1%)DUNE_FR_CCIN2P3_DIS…DUNE_FR_CCIN2P3_DISK (0%)DUNE_ES_PIC (0%)

RSEs used

NameInputsOutputs
DUNE_US_FNAL_DISK_STAGE1530
PRAGUE500
NIKHEF480
RAL-PP440
SURFSARA410
RAL_ECHO390
QMUL350
DUNE_FR_CCIN2P3_DISK40
DUNE_ES_PIC10
None035

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
UK_Manchester860
US_UChicago810
ES_PIC760
US_FNAL-FermiGrid330
UK_Lancaster310
UK_RAL-PPD200
US_Wisconsin190
FR_CCIN2P370
UK_Bristol60
UK_QMUL50
US_Colorado50
UK_Oxford40
US_NotreDame40
CERN20
UK_RAL-Tier110

Jobscript

#!/bin/bash

# FCL file and DUNE software version/qualifier to be used
FCL_FILE=${FCL_FILE:-$INPUT_TAR_DIR_LOCAL/secondaryVertexing.fcl}
DUNE_VERSION=${DUNE_VERSION:-v10_04_07d01}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}

# Make sure that we're not beeing greedy with resources...
if [ -z ${JUSTIN_PROCESSORS} ]; then
 JUSTIN_PROCESSORS=1
fi

echo "Justin processors: ${JUSTIN_PROCESSORS}"

export TF_NUM_THREADS=${JUSTIN_PROCESSORS}
export OPENBLAS_NUM_THREADS=${JUSTIN_PROCESSORS}
export JULIA_NUM_THREADS=${JUSTIN_PROCESSORS}
export MKL_NUM_THREADS=${JUSTIN_PROCESSORS}
export NUMEXPR_NUM_THREADS=${JUSTIN_PROCESSORS}
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS}

# setup the DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh
source $INPUT_TAR_DIR_LOCAL/setup-grid
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
mrbslp

export FW_SEARCH_PATH=.:${INPUT_TAR_DIR_LOCAL}:$FW_SEARCH_PATH
export FHICL_FILE_PATH=.:${INPUT_TAR_DIR_LOCAL}:$FHICL_FILE_PATH

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`

campaign="justIN.w${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

# Here is where the LArSoft command is call it 
(
# Do the scary preload stuff in a subshell!
export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so

lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
)

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"

echo '=== Start last 100 lines of lar log file ==='
tail -100 ${fname}_reco_${now}.log
echo '=== End last 100 lines of lar log file ==='

mv HierarchyRecoPerformance.root HierarchyRecoPerformance_${fname}.root

if [ $larExit -eq 0 ] ; then
  # Success !
  echo "$pfn" > justin-processed-pfns.txt
  jobscriptExit=0
else
  # Oh :(
  jobscriptExit=1
fi

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $jobscriptExit
justIN time: 2025-05-14 07:41:18 UTC       justIN version: 01.03.00
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