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Workflow 5618, Stage 1

Priority50
Processors1
Wall seconds80000
Image/cvmfs/singularity.opensciencegrid.org/fermilab/fnal-wn-sl7:latest
RSS bytes4194304000 (4000 MiB)
Max distance for inputs30.0
Enabled input RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Glasgow, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scopeusertests
Events for this stage

Output patterns

 DestinationPatternLifetimeFor next stageRSE expression
1https://fndcadoor.fnal.gov:2880/dune/scratch/users/lavaut/05618/1/1*singleHit*.*

Environment variables

NameValue
INPUT_TAR_DIR_LOCAL/cvmfs/fifeuser4.opensciencegrid.org/sw/dune/828a61136282c9f03edb490c0dba774fd0591473

File states

Total filesFindingUnallocatedAllocatedOutputtingProcessedNot foundFailed
5000000019652602433

Job states

TotalSubmittedStartedProcessingOutputtingFinishedNotusedAbortedStalledJobscript errorOutputting failedNone processed
146180000765303714523206560
Files processed00100100200200300300400400Mar-18 14:00Mar-18 22:00Mar-19 06:00Mar-19 14:00Mar-19 22:00Mar-20 06:00Mar-20 14:00Mar-20 22:00Mar-21 06:00Mar-21 14:00Mar-21 22:00Mar-22 06:00Mar-22 14:00Mar-22 22:00Mar-23 06:00Mar-23 14:00Mar-23 22:00Mar-24 06:00Mar-24 14:00Mar-24 22:00Mar-25 06:00Files processedBin start timesNumber per binCERNUK_BrunelCZ_FZUUK_LancasterUS_ColoradoES_PICUK_RAL-PPDFR_CCIN2P3UK_RAL-Tier1UK_GlasgowUK_ImperialUK_QMULUS_UChicagoUK_ManchesterUS_WisconsinUS_FNAL-FermiG…US_FNAL-FermiGridUS_FNAL-T1CA_SFUUK_DurhamUK_LiverpoolUK_BristolUS_UConn-HPCUK_Oxford
Replicas per RSE2073480.21694177627666266.32111664238061061274.7148638131122232.2307916718228180336.4031595806982138.14904535971522107362.5788279523408130.1511060988810621374.74213125978514128.8313506014712312377.89611758479896128.721019767557555379.52181473054264128.70108576605327Replicas per RSEDUNE_US_FNAL_DISK_STAGE (59…DUNE_US_FNAL_DISK_STAGE (59%)FNAL_DCACHE (30%)SURFSARA (5%)RAL-PP (3%)DUNE_FR_CCIN2P3_DISK (0%)NIKHEF (0%)RAL_ECHO (0%)

RSEs used

NameInputsOutputs
DUNE_US_FNAL_DISK_STAGE47440
SURFSARA4710
RAL-PP2910
DUNE_FR_CCIN2P3_DISK470
NIKHEF350
RAL_ECHO150
None03930

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

SiteAllocatedOutputting
US_NotreDame7090
US_FNAL-FermiGrid1911
US_UChicago1270
US_UConn-HPC1150
NL_NIKHEF650
US_PuertoRico640
CERN430
US_Colorado220
ES_PIC190
CZ_FZU170
UK_Imperial140
UK_RAL-PPD120
US_Wisconsin110
US_FNAL-T1100
FR_CCIN2P390
UK_QMUL80
UK_Manchester81
UK_RAL-Tier160
CA_SFU50
UK_Liverpool30
UK_Glasgow20
UK_Brunel10

Jobscript

#!/bin/bash
:<<'EOF'

To use this jobscript to process 10 files from the dc4-vd-coldbox-bottom
data and put the output in the usertests namespace (MetaCat) and 
scope (Rucio), and in the usertests:output-test-01 dataset in MetaCat and
Rucio, use this command to create the workflow:

justin simple-workflow \
--mql \
"files from dune:all where core.run_type='dc4-vd-coldbox-bottom' and dune.campaign='dc4' limit 10" \
--jobscript dc4-vd-coldbox-bottom.jobscript --max-distance 30 --rss-mb 4000 \
--scope usertests --output-pattern '*_reco_data_*.root:output-test-01' 

The following optional environment variables can be set when creating the
workflow/stage: FCL_FILE, NUM_EVENTS, DUNE_VERSION, DUNE_QUALIFIER 

EOF

# fcl file and DUNE software version/qualifier to be used
FCL_FILE=MyrunSingleHit_PDHD_multi.fcl
DUNE_VERSION=${DUNE_VERSION:-v10_00_02d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi


did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

export PRODUCTS=$INPUT_TAR_DIR_LOCAL:${PRODUCTS}
echo "PRODUCTS: ${PRODUCTS}"
echo "DUNESW_DIR: ${DUNESW_DIR}"


# Properly setup custom code with INPUT_TAR_DIR_LOCAL

export DUNESW_DIR=${INPUT_TAR_DIR_LOCAL}/dunesw/${DUNE_VERSION}
export DUNESW_FQ_DIR=${DUNESW_DIR}/slf7.x86_64.e26.prof
export DUNESW_LIB=${DUNESW_FQ_DIR}/lib

export PROTODUNEANA_DIR=${INPUT_TAR_DIR_LOCAL}/protoduneana/${DUNE_VERSION}
export PROTODUNEANA_LIB=${PROTODUNEANA_DIR}/include
export PROTODUNEANA_FQ_DIR=${PROTODUNEANA_DIR}/slf7.x86_64.e26.prof
export PROTODUNEANA_LIB=${PROTODUNEANA_FQ_DIR}/lib

export DUNEPROTOTYPES_DIR=${INPUT_TAR_DIR_LOCAL}/duneprototypes/${DUNE_VERSION}
export DUNEPROTOTYPES_INC=${DUNEPROTOTYPES_DIR}/include
export DUNEPROTOTYPES_FQ_DIR=${DUNEPROTOTYPES_DIR}/slf7.x86_64.e26.prof
export DUNEPROTOTYPES_LIB=${DUNEPROTOTYPES_FQ_DIR}/lib

export FHICL_FILE_PATH=${DUNESW_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${DUNEPROTOTYPES_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${PROTODUNEANA_DIR}/fcl:${FHICL_FILE_PATH}
export FHICL_FILE_PATH=${INPUT_TAR_DIR_LOCAL}/myfcl:${FHICL_FILE_PATH}

echo "DUNESW_DIR: ${DUNESW_DIR}"
echo "PROTODUNEANA_DIR: ${PROTODUNEANA_DIR}"
echo "DUNEPROTOTYPES_DIR: ${DUNEPROTOTYPES_DIR}"

source "${INPUT_TAR_DIR_LOCAL}/localProducts_larsoft_v10_00_02d00_prof_e26/setup2"
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

echo " VERSION ACTIVE =  VERSION ACTIVE =  VERSION ACTIVE = "
ups active | grep "dunesw\|duneprototypes"
#mrsetenv
mrbslp

echo "now run lar on these files"
$pfn
#cat file.list
#cat did.list

# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
Ffname=`echo $pfn | awk -F/ '{print $NF}'`
fname=`echo $Ffname | awk -F. '{print $1}'`
outFile=singleHit_output_${now}.root

campaign="justIN.r${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

# Do the scary preload stuff in a subshell!
lar -c $events_option ${INPUT_TAR_DIR_LOCAL}/myfcl/$FCL_FILE  -T $outFile $pfn  > log_singleHit_${now}.log 2>&1

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"

 echo "$pfn" > justin-processed-pfns.txt
#cat file.list > justin-processed-pfns.txt

echo "processed files"
#cat justin-processed-pfns.txt

ls -lRS

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
#exit $jobscriptExit
exit $larExit

justIN time: 2025-05-22 23:06:23 UTC       justIN version: 01.03.01
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