Workflow 4126, Stage 1

Priority	50
Processors	1
Wall seconds	3600
RSS bytes	6291456000 (6000 MiB)
Max distance for inputs	30.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CA_SFU, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_GLASGOW, DUNE_UK_LANCASTER_CEPH, DUNE_UK_MANCHESTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	BR_CBPF, CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-PPD, UK_RAL-Tier1, UK_Sheffield, US_BNL, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/chappell/sec_vtx/04126/1	*.pndr

Environment variables

Name	Value
INPUT_TAR_DIR_LOCAL	/cvmfs/fifeuser3.opensciencegrid.org/sw/dune/7c097d5aa2ec2c5bbf8b11200d19c22865134b5c
NUM_EVENTS	100

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
10	0	0	0	0	0	0	10

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
91	0	0	0	0	0	0	0	14	0	77	0

RSEs used

Name	Inputs	Outputs
DUNE_US_FNAL_DISK_STAGE	54	0
DUNE_FR_CCIN2P3_DISK	6	0

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
US_NotreDame	10	10
US_UChicago	0	15
US_FNAL-FermiGrid	0	9
NL_SURFsara	0	5
US_Colorado	0	1

Jobscript

#!/bin/bash
# fcl file and DUNE software version/qualifier to be used
FCL_FILE=pndr.fcl
DUNE_VERSION=${DUNE_VERSION:-v09_92_00d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}
FW_SEARCH_PATH=.:$INPUT_TAR_DIR_LOCAL:$FW_SEARCH_PATH
FHICL_FILE_PATH=.:INPUT_TAR_DIR_LOCAL:$FHICL_FILE_PATH
echo $FW_SEARCH_PATH

cp $INPUT_TAR_DIR_LOCAL/pndr.fcl .
cp $INPUT_TAR_DIR_LOCAL/setup-grid .
cp -r $INPUT_TAR_DIR_LOCAL/localProducts* .

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

# the xroot lib for streaming non-root files is in testproducts, 
# so add it to the start of the path
export PRODUCTS=/cvmfs/dune.opensciencegrid.org/products/dune/testproducts:${PRODUCTS}
setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"
export OMP_NUM_THREADS=${JUSTIN_PROCESSORS} 

source setup-grid
mrbslp

    # First get an unprocessed file from this stage
    did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

    if [ "$did_pfn_rse" = "" ] ; then
      echo "Nothing to process - exit jobscript"
      exit 0
    fi

    # Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
    echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

    # pfn is also needed when creating justin-processed-pfns.txt
    pfn=`echo $did_pfn_rse | cut -f2 -d' '`
    echo "Input PFN ${i} = $pfn"

    # Construct outFile from input $pfn 
    now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
    Ffname=`echo $pfn | awk -F/ '{print $NF}'`
    fname=`echo $Ffname | awk -F. '{print $1}'`

    campaign="justIN.r${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

    (
    # Do the scary preload stuff in a subshell!
    export LD_PRELOAD=${XROOTD_LIB}/libXrdPosixPreload.so
    echo "$LD_PRELOAD"

    lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
    ls -l
    mv Pandora_Events.pndr Pandora_Events_${fname}.pndr
    )

    # Subshell exits with exit code of last command
    larExit=$?
    echo "lar exit code $larExit"
    echo "$pfn" > justin-processed-pfns.txt

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
exit $larExit