Workflow 2219, Stage 1

Priority	50
Processors	1
Wall seconds	36000
RSS bytes	2097152000 (2000 MiB)
Max distance for inputs	100.0
Enabled input RSEs	CERN_PDUNE_EOS, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_LANCASTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MANCHESTER, MONTECARLO, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled output RSEs	CERN_PDUNE_EOS, DUNE_CERN_EOS, DUNE_ES_PIC, DUNE_FR_CCIN2P3_DISK, DUNE_IN_TIFR, DUNE_IT_INFN_CNAF, DUNE_UK_LANCASTER_CEPH, DUNE_US_BNL_SDCC, DUNE_US_FNAL_DISK_STAGE, FNAL_DCACHE, FNAL_DCACHE_STAGING, FNAL_DCACHE_TEST, MANCHESTER, NIKHEF, PRAGUE, QMUL, RAL-PP, RAL_ECHO, SURFSARA, T3_US_NERSC
Enabled sites	CA_SFU, CA_Victoria, CERN, CH_UNIBE-LHEP, CZ_FZU, ES_CIEMAT, ES_PIC, FR_CCIN2P3, IN_TIFR, IT_CNAF, NL_NIKHEF, NL_SURFsara, UK_Bristol, UK_Brunel, UK_Durham, UK_Edinburgh, UK_Imperial, UK_Lancaster, UK_Liverpool, UK_Manchester, UK_Oxford, UK_QMUL, UK_RAL-Tier1, UK_Sheffield, US_BNL, US_Caltech, US_Colorado, US_FNAL-FermiGrid, US_FNAL-T1, US_Michigan, US_MIT, US_Nebraska, US_NotreDame, US_PuertoRico, US_SU-ITS, US_Swan, US_UChicago, US_UConn-HPC, US_UCSD, US_Wisconsin
Scope	usertests
Events for this stage

Output patterns

	Destination	Pattern	Lifetime	For next stage
1	https://fndcadoor.fnal.gov:2880/dune/scratch/users/ykermaid/02219/1	pdvd_muplus_michel_prod_.

Environment variables

Name	Value
INPUT_TAR_DIR_LOCAL	/cvmfs/fifeuser2.opensciencegrid.org/sw/dune/60b553f5d4dc44305ae4f3385ca232c2dca05727
KEY	muplus
NUM_EVENTS	100

File states

Total files	Finding	Unallocated	Allocated	Outputting	Processed	Not found	Failed
100	0	0	0	0	100	0	0

Job states

Total	Submitted	Started	Processing	Outputting	Finished	Notused	Aborted	Stalled	Jobscript error	Outputting failed	None processed
293	0	0	0	0	203	0	1	44	0	45	0

RSEs used

Name	Inputs	Outputs
MONTECARLO	186	0

Stats of processed input files as CSV or JSON, and of uploaded output files as CSV or JSON (up to 10000 files included)

File reset events, by site

Site	Allocated	Outputting
FR_CCIN2P3	10	3
UK_RAL-Tier1	9	7
UK_Imperial	2	2
UK_Oxford	2	0
NL_NIKHEF	2	9
US_UChicago	1	0
CERN	0	13
UK_Lancaster	0	6
UK_QMUL	0	5
ES_PIC	0	5
CZ_FZU	0	4
ES_CIEMAT	0	4
US_UCSD	0	2

Jobscript

#!/bin/bash
:<<'EOF'

To use this jobscript to process 10 files from the dc4-vd-coldbox-bottom
data and put the output in the usertests namespace (MetaCat) and 
scope (Rucio), and in the usertests:output-test-01 dataset in MetaCat and
Rucio, use this command to create the workflow:

justin simple-workflow \
--mql \
"files from dune:all where core.run_type='dc4-vd-coldbox-bottom' and dune.campaign='dc4' limit 10" \
--jobscript dc4-vd-coldbox-bottom.jobscript --max-distance 30 --rss-mb 4000 \
--scope usertests --output-pattern '*_reco_data_*.root:output-test-01' 

The following optional environment variables can be set when creating the
workflow/stage: FCL_FILE, NUM_EVENTS, DUNE_VERSION, DUNE_QUALIFIER 

EOF

# fcl file and DUNE software version/qualifier to be used
FCL_GEN_FILE=protodunevd_standardsingle_driftX.fcl
FCL_ST1_FILE=protodunevd_refactored_g4_stage1.fcl
FCL_ST2_FILE=protodunevd_refactored_g4_stage2.fcl
FCL_DET_FILE=protodunevd_refactored_detsim.fcl
FCL_REC_FILE=protodunevd_reco.fcl
DUNE_VERSION=${DUNE_VERSION:-v09_90_01d00}
DUNE_QUALIFIER=${DUNE_QUALIFIER:-e26:prof}

# number of events to process from the input file
if [ "$NUM_EVENTS" != "" ] ; then
 events_option="-n $NUM_EVENTS"
fi

# First get an unprocessed file from this stage
did_pfn_rse=`$JUSTIN_PATH/justin-get-file`

if [ "$did_pfn_rse" = "" ] ; then
  echo "Nothing to process - exit jobscript"
  exit 0
fi

# Keep a record of all input DIDs, for pdjson2meta file -> DID mapping
echo "$did_pfn_rse" | cut -f1 -d' ' >>all-input-dids.txt

# pfn is also needed when creating justin-processed-pfns.txt
pfn=`echo $did_pfn_rse | cut -f2 -d' '`
echo "Input PFN = $pfn"

# Setup DUNE environment
source /cvmfs/dune.opensciencegrid.org/products/dune/setup_dune.sh

export PRODUCTS=$INPUT_TAR_DIR_LOCAL:${PRODUCTS}

echo "PRODUCTS: ${PRODUCTS}"

setup dunesw "$DUNE_VERSION" -q "$DUNE_QUALIFIER"

echo "DUNESW_DIR: ${DUNESW_DIR}"
export FHICL_FILE_PATH=${INPUT_TAR_DIR_LOCAL}:${FHICL_FILE_PATH}

export FW_SEARCH_PATH=${INPUT_TAR_DIR_LOCAL}/config_data:$FW_SEARCH_PATH

# Properly setup custom code with INPUT_TAR_DIR_LOCAL

export OMP_NUM_THREADS=${JUSTIN_PROCESSORS} 

# Construct outFile from input $pfn 
now=$(date -u +"%Y-%m-%dT_%H%M%SZ")
outGenFile=pdvd_${KEY}_michel_prod_gen_${now}
outSt1File=pdvd_${KEY}_michel_prod_g4_stage1_${now}
outSt2File=pdvd_${KEY}_michel_prod_g4_stage2_${now}
outDetFile=pdvd_${KEY}_michel_prod_detsim_${now}
outRecFile=pdvd_${KEY}_michel_prod_reco_${now}

campaign="justIN.r${JUSTIN_WORKFLOW_ID}s${JUSTIN_STAGE_ID}"

(
# Do the scary preload stuff in a subshell!
lar -c $FCL_GEN_FILE $events_option -T ${outGenFile}_hist.root -o ${outGenFile}.root                    > ${outGenFile}.log 2>&1
lar -c $FCL_ST1_FILE $events_option -T ${outSt1File}_hist.root -o ${outSt1File}.root ${outGenFile}.root > ${outSt1File}.log 2>&1
lar -c $FCL_ST2_FILE $events_option -T ${outSt2File}_hist.root -o ${outSt2File}.root ${outSt1File}.root > ${outSt2File}.log 2>&1
#lar -c $FCL_DET_FILE $events_option -T ${outDetFile}_hist.root -o ${outDetFile}.root ${outSt2File}.root > ${outDetFile}.log 2>&1
#ar -c $FCL_REC_FILE $events_option -T ${outRecFile}_hist.root -o ${outRecFile}.root ${outDetFile}.root > ${outRecFile}.log 2>&1
)

# Subshell exits with exit code of last command
larExit=$?
echo "lar exit code $larExit"
echo "$pfn" > justin-processed-pfns.txt

ls -lRS

# Create compressed tar file with all log files 
tar zcf `echo "$JUSTIN_JOBSUB_ID.logs.tgz" | sed 's/@/_/g'` *.log
#exit $jobscriptExit
exit $larExit