Jobsub ID 97805.1@justin-prod-sched02.dune.hep.ac.uk
Jobsub ID | 97805.1@justin-prod-sched02.dune.hep.ac.uk |
Workflow ID | 4103 |
Stage ID | 1 |
User name | amoor@fnal.gov |
HTCondor Group | group_dune |
Requested | Processors | 1 |
RSS bytes | 8388608000 (8000 MiB) |
Wall seconds limit | 80000 (22 hours) |
Submitted time | 2024-11-15 12:20:31 |
Site | US_UChicago |
Entry | Engage_US_MWT2_iut2_condce_mcore |
Last heartbeat | 2024-11-15 15:29:52 |
From worker node | Hostname | iut2-c423.iu.edu |
cpuinfo | AMD EPYC 7443 24-Core Processor |
OS release | Scientific Linux release 7.9 (Nitrogen) |
Processors | 1 |
RSS bytes | 8388608000 (8000 MiB) |
Wall seconds limit | 86400 (24 hours) |
Inner Apptainer? | True |
Job state | outputting_failed |
Allocator name | justin-allocator-pro.dune.hep.ac.uk |
Started | 2024-11-15 12:22:04 |
Input files | usertests:000375_reco_data_2024-11-14T_092942Z.root
|
Jobscript | Exit code | 1 |
Real time | 0m (0s) |
CPU time | 0m (0s = 0%) |
Outputting started | |
Output files | |
Finished | 2024-11-15 15:29:52 |
List job events Wrapper job log |
Jobscript log (last 10,000 characters)
AFM g4 jobscript.
Input PFN = root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/60/df/000375_reco_data_2024-11-14T_092942Z.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_4_3b/Linux64bit+3.10-2.17-e20-p3913-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 72: 1128 Segmentation fault (core dumped) lar -c $FCL_FILE $events_option -o $outFile "$pfn" > ${fname}_reco_${now}.log 2>&1
=== Start last 100 lines of lar log file ===
%MSG-i generatePrimaries: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655 MCTruthEventAction.cc:112
Generating 1 particles
%MSG
%MSG-i ParticleListActionService: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655
Not Stored Process summary:
compt : 10533
Pair : 28
annihil : 330
phot : 3113
Brem : 2924
conv : 302
Ion : 3212
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 70936157
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService: SimDriftElectrons:elecDrift@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655
Random seed for this event, engine 'elecDrift': 514734393
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655
Random seed for this event, engine 'PDFastSim.photon': 46521047
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 655
Random seed for this event, engine 'PDFastSim.scinttime': 369592035
%MSG
%MSG-w ParticleInventory: ProcessEvent 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Rebuild failed to get the MCParticles. This is expected when running on a generation or simulation step.
%MSG
%MSG-w ParticleInventory: ProcessEvent 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Rebuild failed to get the MCParticles. This is expected when running on a generation or simulation step.
%MSG
%MSG-w ParticleInventory: ProcessEvent 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Rebuild failed to get the MCParticles. This is expected when running on a generation or simulation step.
%MSG
%MSG-w BackTrackerService: ProcessEvent 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Rebuild failed to get the SimChannels. This is expected when running on a generation or simulation step.
%MSG
%MSG-w PhotonBackTrackerService: ProcessEvent 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Rebuild failed to get the OpDetBTRs. This is expected when running on a generation or simulation step.
%MSG
%MSG-i NuRandomService: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656
Random seed for this event, engine 'largeant': 198088544
%MSG
%MSG-i generatePrimaries: larg4Main:largeant@BeginModule 15-Nov-2024 08:07:20 EST run: 20000031 subRun: 0 event: 656 MCTruthEventAction.cc:112
Generating 1 particles
%MSG
%MSG-i ParticleListActionService: larg4Main:largeant@BeginModule 15-Nov-2024 08:08:55 EST run: 20000031 subRun: 0 event: 656
Not Stored Process summary:
conv : 86284
Ion : 226952
compt : 1785431
Pair : 24
annihil : 86314
phot : 576954
Brem : 529777
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:08:55 EST run: 20000031 subRun: 0 event: 656 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:08:55 EST run: 20000031 subRun: 0 event: 656 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 15-Nov-2024 08:08:55 EST run: 20000031 subRun: 0 event: 656 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 15-Nov-2024 08:08:55 EST run: 20000031 subRun: 0 event: 656
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 396838343
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService: SimDriftElectrons:elecDrift@BeginModule 15-Nov-2024 08:09:04 EST run: 20000031 subRun: 0 event: 656
Random seed for this event, engine 'elecDrift': 213176949
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 15-Nov-2024 08:10:24 EST run: 20000031 subRun: 0 event: 656
Random seed for this event, engine 'PDFastSim.photon': 234742479
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 15-Nov-2024 08:10:24 EST run: 20000031 subRun: 0 event: 656
Random seed for this event, engine 'PDFastSim.scinttime': 546648223
%MSG
=== End last 100 lines of lar log file ===
lar exit code 0
Traceback (most recent call last):
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 434, in <module>
main()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 373, in main
mddict = expSpecificMetadata.getmetadata()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 344, in getmetadata
jobt = self.get_job(proc)
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 69, in get_job
raise RuntimeError('sam_metadata_dumper returned nonzero exit status {}.'.format(rc))
RuntimeError: sam_metadata_dumper returned nonzero exit status 1.
extractor_prod.py exit code 1
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
pdjson2metadata exit code 1
.:
total 1539912
-rw-r--r-- 1 dune osgvo 1574464547 Nov 15 10:29 RootOutput-eb01-464a-0205-467b.root
-rw-r--r-- 1 dune osgvo 2378780 Nov 15 08:10 000375_reco_data_2024-11-14T_092942Z_reco_2024-11-15T_122218Z.log
-rw-r--r-- 1 dune osgvo 7414 Nov 15 10:29 jobscript.log
-rw-r--r-- 1 dune osgvo 274 Nov 15 07:22 TFileService-cbb9-d2ec-7fb5-4404.root
-rw-r--r-- 1 dune osgvo 104 Nov 15 07:22 all-input-dids.txt
-rw-r--r-- 1 dune osgvo 0 Nov 15 10:29 000375_reco_data_2024-11-14T_092942Z_reco_data_2024-11-15T_122218Z.root.ext.json
-rw-r--r-- 1 dune osgvo 0 Nov 15 10:29 000375_reco_data_2024-11-14T_092942Z_reco_data_2024-11-15T_122218Z.root.json