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Jobsub ID 97529.0@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID97529.0@justin-prod-sched02.dune.hep.ac.uk
Workflow ID4103
Stage ID1
User nameamoor@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
RSS bytes8388608000 (8000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2024-11-15 02:56:42
SiteUS_FNAL-FermiGrid
EntryFNAL_GPGrid_ce04_mcore_op_duneonly
Last heartbeat2024-11-15 06:23:28
From worker nodeHostnamedunegli-4216307-0-fnpc9032.fnal.gov
cpuinfoIntel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8388608000 (8000 MiB)
Wall seconds limit172800 (48 hours)
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2024-11-15 02:59:52
Input filesusertests:000044_reco_data_2024-11-14T_092338Z.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Outputting started 
Output files
Finished2024-11-15 06:23:28
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

AFM g4 jobscript.
Input PFN = root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/af/40/000044_reco_data_2024-11-14T_092338Z.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_4_3b/Linux64bit+3.10-2.17-e20-p3913-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 72:  1126 Aborted                 (core dumped) lar -c $FCL_FILE $events_option -o $outFile "$pfn" > ${fname}_reco_${now}.log 2>&1
=== Start last 100 lines of lar log file ===
%MSG-i generatePrimaries:  larg4Main:largeant@BeginModule  15-Nov-2024 03:30:46 UTC run: 20000031 subRun: 0 event: 189 MCTruthEventAction.cc:112
Generating 1 particles
%MSG
%MSG-i ParticleListActionService:  larg4Main:largeant@BeginModule  15-Nov-2024 03:32:38 UTC run: 20000031 subRun: 0 event: 189
Not Stored Process summary:
	compt : 2264906
	Pair : 40
	annihil : 109728
	phot : 733527
	Brem : 674065
	conv : 109686
	Ion : 290441
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 03:32:38 UTC run: 20000031 subRun: 0 event: 189 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 03:32:38 UTC run: 20000031 subRun: 0 event: 189 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 03:32:38 UTC run: 20000031 subRun: 0 event: 189 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService:  IonAndScint:IonAndScint@BeginModule  15-Nov-2024 03:32:39 UTC run: 20000031 subRun: 0 event: 189
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 200029968
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService:  SimDriftElectrons:elecDrift@BeginModule  15-Nov-2024 03:32:48 UTC run: 20000031 subRun: 0 event: 189
Random seed for this event, engine 'elecDrift': 809992814
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  15-Nov-2024 03:34:23 UTC run: 20000031 subRun: 0 event: 189
Random seed for this event, engine 'PDFastSim.photon': 700470739
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  15-Nov-2024 03:34:23 UTC run: 20000031 subRun: 0 event: 189
Random seed for this event, engine 'PDFastSim.scinttime': 240459937
%MSG
IonAndScint endJob.
15-Nov-2024 06:22:20 UTC  Closed input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/af/40/000044_reco_data_2024-11-14T_092338Z.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                    0.00924704      63.3778       10227.7      0.417766       746.438        189    
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        5.9195e-05     0.0106831     0.676059     0.00013268     0.0661306       189    
simulate:rns:RandomNumberSaver                1.5493e-05    2.79431e-05   0.000209418   2.3488e-05    1.6346e-05       189    
simulate:largeant:larg4Main                   0.00724528      1.15911       113.203      0.286249       8.26363        189    
simulate:IonAndScint:IonAndScint              6.0583e-05     0.0582931      9.28456     0.000108625    0.677427        189    
simulate:elecDrift:SimDriftElectrons          4.0298e-05     0.569369       94.4082     5.3048e-05      6.88059        189    
simulate:PDFastSim:PDFastSimPAR               5.5142e-05      60.2743       10010.8     9.2265e-05      729.684        189    
[art]:TriggerResults:TriggerResultInserter     7.095e-06    1.0996e-05    3.7379e-05    1.0067e-05    3.8234e-06       189    
end_path:out1:RootOutput                       1.303e-06    3.11487e-06   1.9621e-05     2.843e-06    1.99315e-06      189    
end_path:out1:RootOutput(write)               0.000426906     1.30162       133.214      0.0087293      9.84685        188    
================================================================================================================================
%MSG-i NuRandomService:  RootOutput:out1@EndJob 15-Nov-2024 06:22:20 UTC  ModuleEndJob

Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
  algorithm version: EventTimestamp_v1
   Configured value          Last value   ModuleLabel.InstanceName
        (per event)           200029968   IonAndScint.ISCalcAlg
        (per event)           700470739   PDFastSim.photon
        (per event)           240459937   PDFastSim.scinttime
        (per event)           809992814   elecDrift
        (per event)           480316838   largeant

%MSG

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 20035.8 MB
  Peak resident set size usage (VmHWM): 18048.6 MB
====================================================================================================

TrigReport ---------- Event summary -------------
TrigReport Events total = 189 passed = 189 failed = 0

TrigReport ---------- Modules in End-path ----------
TrigReport        Run    Success      Error Name
TrigReport        189        189          0 out1

TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 11743.348261 Real = 12063.082130

MemReport  ---------- Memory summary [base-10 MB] ------
MemReport  VmPeak = 20035.8 VmHWM = 18048.6

terminate called after throwing an instance of 'cet::coded_exception<art::errors::ErrorCodes, &art::ExceptionDetail::translate[abi:cxx11]>'
  what():  ---- FatalRootError BEGIN
  Fatal Root Error: TBufferFile::AutoExpand
  Request to expand to a negative size, likely due to an integer overflow: 0x80000022 for a max of 0x7ffffffe.
  ROOT severity: 6000
---- FatalRootError END

=== End last 100 lines of lar log file ===
lar exit code 0
Traceback (most recent call last):
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 434, in <module>
    main()
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 373, in main
    mddict = expSpecificMetadata.getmetadata()
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 344, in getmetadata
    jobt = self.get_job(proc)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 69, in get_job
    raise RuntimeError('sam_metadata_dumper returned nonzero exit status {}.'.format(rc))
RuntimeError: sam_metadata_dumper returned nonzero exit status 1.
extractor_prod.py exit code 1
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
pdjson2metadata exit code 1
.:
total 907948
-rw-r--r-- 1 dunegli fnalgrid 928978916 Nov 15 06:22 RootOutput-065c-cf99-0da7-1600.root
-rw-r--r-- 1 dunegli fnalgrid    734289 Nov 15 06:22 000044_reco_data_2024-11-14T_092338Z_reco_2024-11-15T_030005Z.log
-rw-r--r-- 1 dunegli fnalgrid      7749 Nov 15 06:22 jobscript.log
-rw-r--r-- 1 dunegli fnalgrid       274 Nov 15 03:00 TFileService-e718-ff53-2283-08f8.root
-rw-r--r-- 1 dunegli fnalgrid       104 Nov 15 03:00 all-input-dids.txt
-rw-r--r-- 1 dunegli fnalgrid         0 Nov 15 06:22 000044_reco_data_2024-11-14T_092338Z_reco_data_2024-11-15T_030005Z.root.ext.json
-rw-r--r-- 1 dunegli fnalgrid         0 Nov 15 06:22 000044_reco_data_2024-11-14T_092338Z_reco_data_2024-11-15T_030005Z.root.json
justIN time: 2024-11-17 14:48:31 UTC       justIN version: 01.01.09