Jobsub ID 92176.76@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 92176.76@justin-prod-sched02.dune.hep.ac.uk |
| Workflow ID | 3936 |
| Stage ID | 1 |
| User name | imawby@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 43200 (12 hours) |
| Submitted time | 2024-11-06 16:48:03 |
| Site | UK_Manchester |
| Entry | UBoone_T2_UK_Manchester_ce02 |
| Last heartbeat | 2024-11-06 17:28:26 |
| From worker node | Hostname | wn1207081.tier2.hep.manchester.ac.uk |
| cpuinfo | AMD EPYC 7702P 64-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 257400 (71 hours) |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2024-11-06 16:54:06 |
| Input files | fardet-hd:nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Outputting started | |
| Output files | |
| Finished | 2024-11-06 17:28:26 |
| Saved logs | justin-logs:92176.76-justin-prod-sched02.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
rcs
MRB_BUILDDIR=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/0b7ef0f90224874d955352540c7c9e5d7b54b4e7/build_slf7.x86_64
MRB_INSTALL=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/0b7ef0f90224874d955352540c7c9e5d7b54b4e7/localProducts_larsoft_v09_91_02_e26_prof
PRODUCTS=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/0b7ef0f90224874d955352540c7c9e5d7b54b4e7/localProducts_larsoft_v09_91_02_e26_prof:/cvmfs/dune.opensciencegrid.org/products/dune:/cvmfs/larsoft.opensciencegrid.org/products:/cvmfs/larsoft.opensciencegrid.org/packages:/cvmfs/fermilab.opensciencegrid.org/products/common/db/
CETPKG_INSTALL=/cvmfs/fifeuser1.opensciencegrid.org/sw/dune/0b7ef0f90224874d955352540c7c9e5d7b54b4e7/localProducts_larsoft_v09_91_02_e26_prof
local product directory is /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/0b7ef0f90224874d955352540c7c9e5d7b54b4e7/localProducts_larsoft_v09_91_02_e26_prof
----------- this block should be empty ------------------
---------------------------------------------------------
Input PFN = root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/b9/5f/nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root
../justin-jobscript: line 64: 1398 Aborted (core dumped) lar -c $FCL_FILE $events_option "$pfn" > ${fname}_reco_${now}.log 2>&1
lar exit code 134
=== Start last 100 lines of lar log file ===
* Association Name: clusterAssociationsbase * Instance Name: * Type: art::Assns<recob::Shower, recob::Cluster, void>* *
* Association Name: hitAssociationsbase * Instance Name: * Type: art::Assns<recob::Shower, recob::Hit, void>* *
* Association Name: pfShowerAssociationsbase * Instance Name: * Type: art::Assns<recob::Shower, recob::PFParticle, void>* *
* Association Name: spShowerAssociationsbase * Instance Name: * Type: art::Assns<recob::Shower, recob::SpacePoint, void>* *
*************************************************************************************************************************************
: Booking "electron" of type "BDT" from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/electron_all_BDT.weights.xml.
: Reading weight file: /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/electron_all_BDT.weights.xml
<HEADER> DataSetInfo : [Default] : Added class "Signal"
<HEADER> DataSetInfo : [Default] : Added class "Background"
: Booked classifier "BDT" of type: "BDT"
: Booking "muon" of type "BDT" from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/muon_all_BDT.weights.xml.
: Reading weight file: /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/muon_all_BDT.weights.xml
: Booked classifier "BDT" of type: "BDT"
: Booking "photon" of type "BDT" from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/photon_all_BDT.weights.xml.
: Reading weight file: /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/photon_all_BDT.weights.xml
: Booked classifier "BDT" of type: "BDT"
: Booking "pich" of type "BDT" from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/pich_all_BDT.weights.xml.
: Reading weight file: /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/pich_all_BDT.weights.xml
: Booked classifier "BDT" of type: "BDT"
: Booking "proton" of type "BDT" from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/proton_all_BDT.weights.xml.
: Reading weight file: /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/mvapid_weights/proton_all_BDT.weights.xml
: Booked classifier "BDT" of type: "BDT"
06-Nov-2024 16:55:01 GMT Initiating request to open input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/b9/5f/nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root"
06-Nov-2024 16:55:01 GMT Initiating request to open input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/b9/5f/nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root"
06-Nov-2024 16:55:05 GMT Opened input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/b9/5f/nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root"
06-Nov-2024 16:55:05 GMT Opened input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/b9/5f/nu_dune10kt_1x2x6_1100_669_20230826T045257Z_gen_g4_detsim_hitreco__20240227T213108Z_reco2.root"
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_1_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_1_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_1_W_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_2_U_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_2_V_v04_06_00.pt'
Loaded the TorchScript model '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash//PandoraNetworkData/PandoraNet_Vertex_DUNEFD_HD_Accel_2_W_v04_06_00.pt'
daughterClusterListU.size(): 44
daughterClusterListV.size(): 47
daughterClusterListW.size(): 50
daughterClusterListU.size(): 44
daughterClusterListV.size(): 47
daughterClusterListW.size(): 50
daughterClusterListU.size(): 44
daughterClusterListV.size(): 47
daughterClusterListW.size(): 50
daughterClusterListU.size(): 44
daughterClusterListV.size(): 47
daughterClusterListW.size(): 50
daughterClusterListU.size(): 0
daughterClusterListV.size(): 0
daughterClusterListW.size(): 0
daughterClusterListU.size(): 0
daughterClusterListV.size(): 0
daughterClusterListW.size(): 0
daughterClusterListU.size(): 0
daughterClusterListV.size(): 0
daughterClusterListW.size(): 0
%MSG-w ShowerPCADirection: LArPandoraModularShowerCreation:pandoraShowerRedo@BeginModule 06-Nov-2024 16:55:12 GMT run: 1100 subRun: 1 event: 66901
0 spacepoints in shower, not calculating direction
%MSG
%MSG-e ShowerProducedPtrsHolder: LArPandoraModularShowerCreation:pandoraShowerRedo@BeginModule 06-Nov-2024 16:55:12 GMT run: 1100 subRun: 1 event: 66901
Trying to add data product: InitialTrack. This element does not exist in the element holder
%MSG
%MSG-e ShowerProducedPtrsHolder: LArPandoraModularShowerCreation:pandoraShowerRedo@BeginModule 06-Nov-2024 16:55:12 GMT run: 1100 subRun: 1 event: 66901
Trying to add data product: InitialTrack. This element does not exist in the element holder
%MSG
%MSG-e ShowerProducedPtrsHolder: LArPandoraModularShowerCreation:pandoraShowerRedo@BeginModule 06-Nov-2024 16:55:12 GMT run: 1100 subRun: 1 event: 66901
Trying to add data product: ShowerPCA. This element does not exist in the element holder
%MSG
%MSG-e ShowerProducedPtrsHolder: LArPandoraModularShowerCreation:pandoraShowerRedo@BeginModule 06-Nov-2024 16:55:12 GMT run: 1100 subRun: 1 event: 66901
Trying to add data product: ShowerPCA. This element does not exist in the element holder
%MSG
: Rebuilding Dataset Default
<ERROR> : 0-th variable of the event is NaN --> return MVA value -999,
<ERROR> : that's all I can do, please fix or remove this event.
<ERROR> : 0-th variable of the event is NaN --> return MVA value -999,
<ERROR> : that's all I can do, please fix or remove this event.
<ERROR> : 0-th variable of the event is NaN --> return MVA value -999,
<ERROR> : that's all I can do, please fix or remove this event.
<ERROR> : 0-th variable of the event is NaN --> return MVA value -999,
<ERROR> : that's all I can do, please fix or remove this event.
<ERROR> : 0-th variable of the event is NaN --> return MVA value -999,
<ERROR> : that's all I can do, please fix or remove this event.
Boundary wire vector sizes: 490, 549, 521
minwire 0: 1895
minwire 1: 1023
minwire 2: 1553
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 499
Classifier summary:
Output 0: 0.0437576,
Output 1: 0.98923, 5.67021e-05, 0.00295355, 0.00775997,
Output 2: 0.00261587, 0.562805, 0.434368, 0.000210742,
Output 3: 0.0797861, 0.256305, 0.419937, 0.243972,
Output 4: 0.00768001, 0.637812, 0.337193, 0.0173154,
Output 5: 0.999855, 0.000123308, 1.71729e-05, 4.46735e-06,
Output 6: 0.997158, 0.00272729, 8.58386e-05, 2.86579e-05,
: Rebuilding Dataset Default
: Rebuilding Dataset Default
: Rebuilding Dataset Default
HT SHOWER: NOT ALL ORIENTATIONS COVERED
terminate called without an active exception
=== End last 100 lines of lar log file === 