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Jobsub ID 76061.0@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID76061.0@justin-prod-sched02.dune.hep.ac.uk
Workflow TestingYes
Workflow ID1
Stage ID1
User nameamcnab@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit3600 (1 hours)
Submitted time2024-09-23 00:59:09
SiteUS_SU-ITS
EntryGlow_US_Syracuse_condor-ce2
Last heartbeat2024-09-23 01:59:08
From worker nodeHostnameCRUSH-OSG-C7-10-5-141-200
cpuinfoIntel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes1073741824 (1024 MiB)
Wall seconds limit171000 (47 hours)
Inner Apptainer?False
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2024-09-23 01:18:43
Input files
JobscriptExit code0
Real time0m (0s)
CPU time0m (0s = 0%)
Outputting started2024-09-23 01:58:04
Output files
Finished2024-09-23 01:59:08
Saved logsjustin-logs:76061.0-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

t(protocol_write, pfn_tmp)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 738, in _retry_protocol_stat
    raise error
  File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 730, in _retry_protocol_stat
    stats = protocol.stat(pfn)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/rse/protocols/gfal.py", line 415, in stat
    raise exception.RSEChecksumUnavailable(message)
rucio.common.exception.RSEChecksumUnavailable: RSE checksum unavailable.
Details: 
Error while processing gfal checksum call (adler32). Error: Domain name resolution failed 
Error while processing gfal checksum call (md5). Error: checksum calculation for MD5 not supported for davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/c0/de/awt-1727054330-iSYFInzVMu
INFO:root:Trying upload with root to RAL_ECHO
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/c0/de/awt-1727054330-iSYFInzVMu
DEBUG:root:gfal.NoRename: checking if file exists root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/c0/de/awt-1727054330-iSYFInzVMu
WARNING:root:Upload attempt failed
INFO:root:Exception: File name in specified scope already exists
Details: File awt-1727054330-iSYFInzVMu in scope testpro already exists on storage as PFN root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/c0/de/awt-1727054330-iSYFInzVMu
Traceback (most recent call last):
  File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 269, in upload
    pfn = self._upload_item(rse_settings=rse_settings,
  File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 646, in _upload_item
    raise FileReplicaAlreadyExists('File %s in scope %s already exists on storage as PFN %s' % (name, scope, pfn))  # wrong exception ?
rucio.common.exception.FileReplicaAlreadyExists: File name in specified scope already exists
Details: File awt-1727054330-iSYFInzVMu in scope testpro already exists on storage as PFN root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/c0/de/awt-1727054330-iSYFInzVMu
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
  warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
ERROR:root:Failed to upload file awt-1727054330-iSYFInzVMu
--- Upload try 1/1
--- Rucio upload 1/1 fails: None of the given files have been uploaded.
--- Exit with 99
'justin-rucio-upload --rse RAL_ECHO --protocol davs --scope testpro --dataset awt-uploads-202439 awt-1727054330-iSYFInzVMu --timeout 1200' returns 99


---------------------------------------------------------------------
US_SU-ITS SURFSARA davs root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt
'xrdcp --force --nopbar --verbose root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt downloaded.txt' returns 0
GFAL_CONFIG_DIR:    GFAL_PLUGIN_DIR: 
justin-rucio-upload attempt 1
DEBUG:root:Num. of files that upload client is processing: 1
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:NeedRegenerationException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x2b99b5b8ff10> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1260
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1727054330-GVUvWXIA7h
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 737
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202439
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202439 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202439 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1727054330-GVUvWXIA7h/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:gfal.Default: checking if file exists None
DEBUG:root:Checking if root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/70/e0/awt-1727054330-GVUvWXIA7h exists
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/70/e0/awt-1727054330-GVUvWXIA7h
--- Upload try 1/1
--- Rucio upload 1/1 fails: The requested service is not available at the moment.
Details: An unknown exception occurred.
Details: Failed to stat file (No route to host)
--- Exit with 99
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202439 awt-1727054330-GVUvWXIA7h --timeout 1200' returns 99


subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=623499601/CN=172705432385
issuer    : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=623499601
identity  : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=623499601
type      : RFC compliant proxy
strength  : 2048 bits
path      : /srv/home/awt-proxy.pem
timeleft  : 167:21:09
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO        : dune
subject   : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer    : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft  : 145:42:29
uri       : voms1.fnal.gov:15042

===== Results =====

Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset  --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands

Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== US_SU-ITS DUNE_CERN_EOS 51 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_ES_PIC 51 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_UK_LANCASTER_CEPH 0 99 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS MANCHESTER 0 99 root://bohr3226.tier2.hep.manchester.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS QMUL 51 99 root://xrootd01.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL_ECHO 0 99 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS SURFSARA 0 99 root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
justIN time: 2024-09-29 11:21:25 UTC       justIN version: 01.01.08