Jobsub ID 67423.0@justin-prod-sched02.dune.hep.ac.uk
Jobsub ID | 67423.0@justin-prod-sched02.dune.hep.ac.uk |
Workflow Testing | Yes |
Workflow ID | 1 |
Stage ID | 1 |
User name | amcnab@fnal.gov |
HTCondor Group | group_dune.prod_mcsim |
Requested | Processors | 1 |
RSS bytes | 1073741824 (1024 MiB) |
Wall seconds limit | 3600 (1 hours) |
Submitted time | 2024-09-06 12:09:43 |
Site | US_SU-ITS |
Entry | Glow_US_Syracuse_condor-ce4 |
Last heartbeat | 2024-09-06 12:59:56 |
From worker node | Hostname | CRUSH-OSG-C7-10-5-141-213 |
cpuinfo | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz |
OS release | Scientific Linux release 7.9 (Nitrogen) |
Processors | 1 |
RSS bytes | 1073741824 (1024 MiB) |
Wall seconds limit | 171000 (47 hours) |
Inner Apptainer? | False |
Job state | stalled |
Allocator name | justin-allocator-pro.dune.hep.ac.uk |
Started | 2024-09-06 12:24:36 |
Input files | |
Outputting started | 2024-09-06 12:59:56 |
Output files | |
Finished | 2024-09-06 13:07:13 |
List job events Wrapper job log |
Jobscript log (last 10,000 characters)
INFO:root:Trying upload with davs to RAL_ECHO
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:gfal.NoRename: checking if file exists davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:gfal.NoRename: checking if file exists davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.NoRename: uploading file from awt-1725625481-nteD48V1Py to davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
INFO:root:Successful upload of temporary file. davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:gfal.NoRename: getting stats of file davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/be/cc/awt-1725625481-nteD48V1Py
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=603a0701 Found=603a0701
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1725625481-nteD48V1Py
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x2b825ab98fd0> acquired
DEBUG:dogpile.lock:Calling creation function for previously expired value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Resetting dropped connection: dune-rucio.fnal.gov
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202436/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202436/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202436 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse RAL_ECHO --protocol davs --scope testpro --dataset awt-uploads-202436 awt-1725625481-nteD48V1Py --timeout 1200' returns 0
---------------------------------------------------------------------
US_SU-ITS SURFSARA davs root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt
'xrdcp --force --nopbar --verbose root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt downloaded.txt' returns 0
GFAL_CONFIG_DIR: GFAL_PLUGIN_DIR:
justin-rucio-upload attempt 1
DEBUG:root:Num. of files that upload client is processing: 1
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:NeedRegenerationException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x2b689c60cfa0> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1260
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1725625481-cHkfzfBy2y
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 720
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202436
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202436 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202436 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1725625481-cHkfzfBy2y/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:gfal.Default: checking if file exists None
DEBUG:root:Checking if root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/05/5d/awt-1725625481-cHkfzfBy2y exists
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/05/5d/awt-1725625481-cHkfzfBy2y
--- Upload try 1/1
--- Rucio upload 1/1 fails: The requested service is not available at the moment.
Details: An unknown exception occurred.
Details: Failed to stat file (No route to host)
--- Exit with 99
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202436 awt-1725625481-cHkfzfBy2y --timeout 1200' returns 99
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1760975276/CN=172562547677
issuer : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1760975276
identity : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1760975276
type : RFC compliant proxy
strength : 2048 bits
path : /srv/home/awt-proxy.pem
timeleft : 167:24:52
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO : dune
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft : 158:29:19
uri : voms1.fnal.gov:15042
===== Results =====
Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands
Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== US_SU-ITS DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_ES_PIC 53 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS MANCHESTER 0 0 root://bohr3226.tier2.hep.manchester.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS QMUL 51 99 root://xrootd01.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS SURFSARA 0 99 root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs