Jobsub ID 63039.0@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 63039.0@justin-prod-sched02.dune.hep.ac.uk |
| Workflow Testing | Yes |
| Workflow ID | 1 |
| Stage ID | 1 |
| User name | amcnab@fnal.gov |
| HTCondor Group | group_dune.prod_mcsim |
| Requested | Processors | 1 |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 3600 (1 hours) |
| Submitted time | 2024-08-28 17:21:51 |
| Site | US_SU-ITS |
| Entry | Glow_US_Syracuse_condor-ce4 |
| Last heartbeat | 2024-08-28 18:02:30 |
| From worker node | Hostname | CRUSH-OSG-C7-10-5-141-213 |
| cpuinfo | Intel(R) Xeon(R) CPU E5-2698 v3 @ 2.30GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 171000 (47 hours) |
| Inner Apptainer? | False |
| Job state | finished |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2024-08-28 17:33:18 |
| Input files | |
| Jobscript | Exit code | 0 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Outputting started | 2024-08-28 18:02:10 |
| Output files | |
| Finished | 2024-08-28 18:02:30 |
| Saved logs | justin-logs:63039.0-justin-prod-sched02.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
e/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 738, in _retry_protocol_stat
raise error
File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 730, in _retry_protocol_stat
stats = protocol.stat(pfn)
File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/rse/protocols/gfal.py", line 415, in stat
raise exception.RSEChecksumUnavailable(message)
rucio.common.exception.RSEChecksumUnavailable: RSE checksum unavailable.
Details:
Error while processing gfal checksum call (adler32). Error: Domain name resolution failed
Error while processing gfal checksum call (md5). Error: checksum calculation for MD5 not supported for davs://webdav.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/a5/07/awt-1724866402-PV03X4Fy7E
INFO:root:Trying upload with root to RAL_ECHO
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/a5/07/awt-1724866402-PV03X4Fy7E
DEBUG:root:gfal.NoRename: checking if file exists root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/a5/07/awt-1724866402-PV03X4Fy7E
WARNING:root:Upload attempt failed
INFO:root:Exception: File name in specified scope already exists
Details: File awt-1724866402-PV03X4Fy7E in scope testpro already exists on storage as PFN root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/a5/07/awt-1724866402-PV03X4Fy7E
Traceback (most recent call last):
File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 269, in upload
pfn = self._upload_item(rse_settings=rse_settings,
File "/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/rucio/client/uploadclient.py", line 646, in _upload_item
raise FileReplicaAlreadyExists('File %s in scope %s already exists on storage as PFN %s' % (name, scope, pfn)) # wrong exception ?
rucio.common.exception.FileReplicaAlreadyExists: File name in specified scope already exists
Details: File awt-1724866402-PV03X4Fy7E in scope testpro already exists on storage as PFN root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/a5/07/awt-1724866402-PV03X4Fy7E
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v34_4_2/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
ERROR:root:Failed to upload file awt-1724866402-PV03X4Fy7E
--- Upload try 1/1
--- Rucio upload 1/1 fails: None of the given files have been uploaded.
--- Exit with 99
'justin-rucio-upload --rse RAL_ECHO --protocol davs --scope testpro --dataset awt-uploads-202435 awt-1724866402-PV03X4Fy7E --timeout 1200' returns 99
---------------------------------------------------------------------
US_SU-ITS SURFSARA davs root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt
'xrdcp --force --nopbar --verbose root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt downloaded.txt' returns 0
GFAL_CONFIG_DIR: GFAL_PLUGIN_DIR:
justin-rucio-upload attempt 1
DEBUG:root:Num. of files that upload client is processing: 1
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:NeedRegenerationException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x2b109b514fa0> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=SURFSARA HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA HTTP/1.1" 200 1260
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1724866402-4gRTKGxUNk
DEBUG:urllib3.connectionpool:Resetting dropped connection: dune-rucio.fnal.gov
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/SURFSARA/attr/ HTTP/1.1" 200 308
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 720
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202435
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202435 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202435 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1724866402-4gRTKGxUNk/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at SURFSARA
DEBUG:root:gfal.Default: connecting to storage
DEBUG:root:gfal.Default: checking if file exists None
DEBUG:root:Checking if root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/3e/86/awt-1724866402-4gRTKGxUNk exists
DEBUG:root:gfal.Default: checking if file exists root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/3e/86/awt-1724866402-4gRTKGxUNk
--- Upload try 1/1
--- Rucio upload 1/1 fails: The requested service is not available at the moment.
Details: An unknown exception occurred.
Details: Failed to stat file (No route to host)
--- Exit with 99
'justin-rucio-upload --rse SURFSARA --protocol davs --scope testpro --dataset awt-uploads-202435 awt-1724866402-4gRTKGxUNk --timeout 1200' returns 99
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=276360038/CN=172486639810
issuer : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=276360038
identity : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=276360038
type : RFC compliant proxy
strength : 2048 bits
path : /srv/home/awt-proxy.pem
timeleft : 167:31:19
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO : dune
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft : 153:13:03
uri : voms1.fnal.gov:15042
===== Results =====
Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands
Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== US_SU-ITS DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_FR_CCIN2P3_DISK 51 99 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_BNL_SDCC 0 99 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS MANCHESTER 0 99 root://bohr3226.tier2.hep.manchester.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS QMUL 51 99 root://xrootd01.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS RAL_ECHO 0 99 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== US_SU-ITS SURFSARA 0 99 root://penguin12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs 