Jobsub ID 59680.53@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 59680.53@justin-prod-sched02.dune.hep.ac.uk |
| Workflow ID | 2869 |
| Stage ID | 1 |
| User name | amoor@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 80000 (22 hours) |
| Submitted time | 2024-08-19 10:52:36 |
| Site | US_FNAL-FermiGrid |
| Entry | FNAL_GPGrid_ce04_mcore_op_duneonly |
| Last heartbeat | 2024-08-19 13:35:29 |
| From worker node | Hostname | dunegli-4154583-0-fnpc9041.fnal.gov |
| cpuinfo | Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 172800 (48 hours) |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2024-08-19 11:05:11 |
| Input files | usertests:000431_reco_data_2024-08-16T_162313Z.root
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Outputting started | |
| Output files | |
| Finished | 2024-08-19 13:35:29 |
| Saved logs | justin-logs:59680.53-justin-prod-sched02.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
AFM g4 jobscript.
Input PFN = root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/bb/8a/000431_reco_data_2024-08-16T_162313Z.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_4_3b/Linux64bit+3.10-2.17-e20-p3913-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 72: 1280 Aborted (core dumped) lar -c $FCL_FILE $events_option -o $outFile "$pfn" > ${fname}_reco_${now}.log 2>&1
=== Start last 100 lines of lar log file ===
%MSG
%MSG-i ParticleListActionService: larg4Main:largeant@BeginModule 19-Aug-2024 11:27:24 UTC run: 20000031 subRun: 0 event: 414
Not Stored Process summary:
compt : 2498213
annihil : 121950
Pair : 76
phot : 815479
Brem : 748589
conv : 121872
Ion : 324609
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 11:27:24 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 11:27:24 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 11:27:24 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 19-Aug-2024 11:27:24 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 848089
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService: SimDriftElectrons:elecDrift@BeginModule 19-Aug-2024 11:27:31 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'elecDrift': 246648247
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 19-Aug-2024 11:28:43 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'PDFastSim.photon': 338914067
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 19-Aug-2024 11:28:43 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'PDFastSim.scinttime': 450103317
%MSG
Plugin version SecClnt v5.4.3 is incompatible with secztn v5.6.8 (must be <= 5.4.x) in sec.protocol libXrdSecztn-5.so
IonAndScint endJob.
19-Aug-2024 13:35:08 UTC Closed input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/bb/8a/000431_reco_data_2024-08-16T_162313Z.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 0.00634771 21.24 7729.04 0.279679 379.362 414
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 6.1823e-05 0.000204187 0.0158706 0.000122318 0.000782768 414
simulate:rns:RandomNumberSaver 1.6774e-05 2.49852e-05 0.000199489 2.2442e-05 1.0205e-05 414
simulate:largeant:larg4Main 0.00557103 0.839723 149.51 0.259648 7.37788 414
simulate:IonAndScint:IonAndScint 6.763e-05 0.0194366 7.2144 0.000110969 0.354116 414
simulate:elecDrift:SimDriftElectrons 4.2684e-05 0.193454 71.5852 5.5776e-05 3.51373 414
simulate:PDFastSim:PDFastSimPAR 6.005e-05 20.1848 7500.73 8.84165e-05 368.176 414
simulate:muonfilter:LArG4ParticleFilter 1.1467e-05 6.07809e-05 0.00412008 1.90105e-05 0.000267891 414
[art]:TriggerResults:TriggerResultInserter 8.995e-06 1.28894e-05 3.9646e-05 1.2127e-05 2.40761e-06 414
end_path:out1:RootOutput 5.731e-06 9.59921e-06 0.00019828 8.7225e-06 9.41796e-06 414
end_path:out1:RootOutput(write) 3.966e-06 0.00164253 0.439904 4.704e-06 0.0235601 413
================================================================================================================================
%MSG-i NuRandomService: RootOutput:out1@EndJob 19-Aug-2024 13:35:08 UTC ModuleEndJob
Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
algorithm version: EventTimestamp_v1
Configured value Last value ModuleLabel.InstanceName
(per event) 848089 IonAndScint.ISCalcAlg
(per event) 338914067 PDFastSim.photon
(per event) 450103317 PDFastSim.scinttime
(per event) 246648247 elecDrift
(per event) 831144890 largeant
%MSG
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 18486.1 MB
Peak resident set size usage (VmHWM): 15233 MB
====================================================================================================
TrigReport ---------- Event summary -------------
TrigReport Events total = 414 passed = 5 failed = 409
TrigReport ---------- Modules in End-path ----------
TrigReport Run Success Error Name
TrigReport 5 5 0 out1
TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 8801.937529 Real = 8897.859575
MemReport ---------- Memory summary [base-10 MB] ------
MemReport VmPeak = 18486.1 VmHWM = 15233
terminate called after throwing an instance of 'cet::coded_exception<art::errors::ErrorCodes, &art::ExceptionDetail::translate[abi:cxx11]>'
what(): ---- FatalRootError BEGIN
Fatal Root Error: TBufferFile::Expand
Requested size (2147483647) is too large (max is 2147483646).
ROOT severity: 6000
---- FatalRootError END
=== End last 100 lines of lar log file ===
lar exit code 0
Traceback (most recent call last):
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 434, in <module>
main()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 373, in main
mddict = expSpecificMetadata.getmetadata()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 344, in getmetadata
jobt = self.get_job(proc)
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 69, in get_job
raise RuntimeError('sam_metadata_dumper returned nonzero exit status {}.'.format(rc))
RuntimeError: sam_metadata_dumper returned nonzero exit status 1.
extractor_prod.py exit code 1
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
pdjson2metadata exit code 1
.:
total 109336
-rw-r--r-- 1 dunegli fnalgrid 110292815 Aug 19 13:35 RootOutput-dbe1-68ed-5b60-282f.root
-rw-r--r-- 1 dunegli fnalgrid 1528768 Aug 19 13:35 000431_reco_data_2024-08-16T_162313Z_reco_2024-08-19T_110514Z.log
-rw-r--r-- 1 dunegli fnalgrid 7766 Aug 19 13:35 jobscript.log
-rw-r--r-- 1 dunegli fnalgrid 274 Aug 19 11:05 TFileService-dd5d-8c91-8409-ead2.root
-rw-r--r-- 1 dunegli fnalgrid 104 Aug 19 11:05 all-input-dids.txt
-rw-r--r-- 1 dunegli fnalgrid 0 Aug 19 13:35 000431_reco_data_2024-08-16T_162313Z_reco_data_2024-08-19T_110514Z.root.ext.json
-rw-r--r-- 1 dunegli fnalgrid 0 Aug 19 13:35 000431_reco_data_2024-08-16T_162313Z_reco_data_2024-08-19T_110514Z.root.json 