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21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.

Jobsub ID 426542.134@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID426542.134@justin-prod-sched01.dune.hep.ac.uk
Workflow ID8058
Stage ID1
User nameepennacc@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4194304000 (4000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-07-03 00:56:36
SiteES_PIC
EntryDUNE_T1_ES_PIC_ce15-multicore
Last heartbeat2025-07-03 05:49:03
From worker nodeHostnametdm005.pic.es
cpuinfoAMD EPYC 9654 96-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4194304000 (4000 MiB)
Wall seconds limit216000 (60 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-07-03 05:44:32
Input filesfardet-vd:prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco.root
JobscriptExit code139
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-07-03 05:49:03
Saved logsjustin-logs:426542.134-justin-prod-sched01.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 96 (apa096) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 97 (apa097) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 98 (apa098) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 99 (apa099) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 100 (apa100) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 101 (apa101) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 102 (apa102) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 103 (apa103) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 104 (apa104) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 105 (apa105) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 106 (apa106) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 107 (apa107) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 108 (apa108) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 109 (apa109) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 110 (apa110) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 111 (apa111) has 864 channels from 3/3 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c reco2_supernova_dunevd10kt_1x8x14_3view_30deg_prod2024.fcl root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/22/ff/prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco.root -o prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco_20250703T054440Z_reco2.root -n -1
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xd276a70
StandardRawDigitPrepService::ctor:   Extract service: @0xe049820
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0x720f660
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xd276560
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0xd270c20
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Reading model from /cvmfs/dune.opensciencegrid.org/products/dune/dune_pardata/v01_84_00/CnnModels/cnn_ndkemtrk_pitch_5_wire_44_drift_48_down_6_mean_notes_AtmAndNdk.nnet
Layers 12
Layer 0 Convolution2D
LayerConv2D 48x1x5x5 border_mode valid
Layer 1 Activation
Activation type relu
Layer 2 Dropout
Layer 3 Flatten
Layer 4 Dense
weights 84480
bias 128
Layer 5 Activation
Activation type tanh
Layer 6 Dropout
Layer 7 Dense
weights 128
bias 32
Layer 8 Activation
Activation type tanh
Layer 9 Dropout
Layer 10 Dense
weights 32
bias 4
Layer 11 Activation
Activation type sigmoid
*************************************************************************************************************************************
Unique Ptrs that are added to the event
*************************************************************************************************************************************
* Data Product Name: InitialTrack             * Instance Name:  * Type: std::vector<recob::Track, std::allocator<recob::Track> >*   *
* Data Product Name: ShowerPCA                * Instance Name:  * Type: std::vector<recob::PCAxis, std::allocator<recob::PCAxis> >* *
* Data Product Name: shower                   * Instance Name:  * Type: std::vector<recob::Shower, std::allocator<recob::Shower> >* *
* Association Name:  PFParticlePCAxisAssn     * Instance Name:  * Type: art::Assns<recob::PFParticle, recob::PCAxis, void>*         *
* Association Name:  ShowerPCAxisAssn         * Instance Name:  * Type: art::Assns<recob::Shower, recob::PCAxis, void>*             *
* Association Name:  ShowerTrackAssn          * Instance Name:  * Type: art::Assns<recob::Shower, recob::Track, void>*              *
* Association Name:  ShowerTrackHitAssn       * Instance Name:  * Type: art::Assns<recob::Track, recob::Hit, void>*                 *
* Association Name:  clusterAssociationsbase  * Instance Name:  * Type: art::Assns<recob::Shower, recob::Cluster, void>*            *
* Association Name:  hitAssociationsbase      * Instance Name:  * Type: art::Assns<recob::Shower, recob::Hit, void>*                *
* Association Name:  pfShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::PFParticle, void>*         *
* Association Name:  spShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::SpacePoint, void>*         *
*************************************************************************************************************************************
03-Jul-2025 07:45:27 CEST  Initiating request to open input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/22/ff/prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco.root"
03-Jul-2025 07:45:31 CEST  Opened input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/22/ff/prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco.root"
Begin processing the 1st record. run: 5059 subRun: 0 event: 4321 at 03-Jul-2025 07:45:50 CEST
03-Jul-2025 07:49:00 CEST  Opened output file with pattern "prodmarley_nue_cc_flat_radiological_decay0_dunevd10kt_1x8x14_3view_30deg_20250205T093611Z_gen_000433_supernova_g4stage1_g4stage2_detsim_reco_20250703T054440Z_reco2.root"

====================================================================================================================
TimeTracker printout (sec)            Min           Avg           Max         Median          RMS         nEvts   
====================================================================================================================
[ No processed events ]
====================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3437.6 MB
  Peak resident set size usage (VmHWM): 1822.73 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 03-Jul-2025 07:49:02 CEST ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- FileReadError BEGIN
      ---- FatalRootError BEGIN
        Fatal Root Error: TNetXNGFile::ReadBuffer
        [FATAL] Hand shake failed
        ROOT severity: 3000
      ---- FatalRootError END
      
      The above exception was thrown while processing module StandardPandora/pandora run: 5059 subRun: 0 event: 4321
    ---- FileReadError END
    Exception going through path reco
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::TNetXNGFile
  The remote file is not open
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
---- FatalRootError BEGIN
  Fatal Root Error: TNetXNGFile::Close
  [FATAL] Hand shake failed
  ROOT severity: 3000
---- FatalRootError END
%MSG
../justin-jobscript: line 74:  1147 Segmentation fault      (core dumped) lar -c reco2_supernova_dunevd10kt_1x8x14_3view_30deg_prod2024.fcl $FILE -o ${reco2_name}.root -n -1
justIN time: 2025-08-14 16:37:43 UTC       justIN version: 01.03.02