21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.
Jobsub ID 416432.13@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 416432.13@justin-prod-sched01.dune.hep.ac.uk | |
| Workflow ID | 7666 | |
| Stage ID | 1 | |
| User name | calcuttj@fnal.gov | |
| HTCondor Group | group_dune | |
| Requested | Processors | 1 |
| GPU | No | |
| RSS bytes | 2097152000 (2000 MiB) | |
| Wall seconds limit | 80000 (22 hours) | |
| Submitted time | 2025-06-18 06:39:49 | |
| Site | UK_QMUL | |
| Entry | DUNE_UK_London_QMUL_arcce03 | |
| Last heartbeat | 2025-06-18 07:27:13 | |
| From worker node | Hostname | cn006.htc.esc.qmul |
| cpuinfo | Intel(R) Xeon(R) Gold 6248R CPU @ 3.00GHz | |
| OS release | Scientific Linux release 7.9 (Nitrogen) | |
| Processors | 1 | |
| RSS bytes | 2097152000 (2000 MiB) | |
| Wall seconds limit | 171000 (47 hours) | |
| GPU | ||
| Inner Apptainer? | True | |
| Job state | jobscript_error | |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk | |
| Started | 2025-06-18 06:40:43 | |
| Input files | monte-carlo-007666-000025 | |
| Jobscript | Exit code | 247 |
| Real time | 0m (0s) | |
| CPU time | 0m (0s = 0%) | |
| Max RSS bytes | 0 (0 MiB) | |
| Outputting started | ||
| Output files | ||
| Finished | 2025-06-18 07:27:13 | |
| Saved logs | justin-logs:416432.13-justin-prod-sched01.dune.hep.ac.uk.logs.tgz | |
| List job events Wrapper job log | ||
Jobscript log (last 10,000 characters)
07:48:26 BST Opened input file "placeholder_1_416432_13_1750228854_stage1.root"
18-Jun-2025 07:48:34 BST Opened output file with pattern "placeholder_1_416432_13_1750228854_stage1_stage2.root"
18-Jun-2025 07:51:04 BST Closed output file "placeholder_1_416432_13_1750228854_stage1_stage2.root"
18-Jun-2025 07:51:04 BST Closed input file "placeholder_1_416432_13_1750228854_stage1.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 7.27558 9.89031 12.3249 10.2054 1.53383 10
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000315137 0.000406572 0.00116726 0.00032144 0.000253616 10
simulate:IonAndScint:IonAndScint 1.50937 2.04829 2.59203 2.07171 0.319318 10
simulate:IonAndScintExternal:IonAndScint 0.00156645 0.00297404 0.00445057 0.00309801 0.000827883 10
[art]:TriggerResults:TriggerResultInserter 1.5177e-05 2.49449e-05 0.000102147 1.66585e-05 2.57386e-05 10
end_path:out1:RootOutput 3.231e-06 5.8988e-06 2.6909e-05 3.5965e-06 7.00808e-06 10
end_path:out1:RootOutput(write) 5.76299 7.83806 9.72967 8.13024 1.22439 10
================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 4662.15 MB
Peak resident set size usage (VmHWM): 3646.8 MB
Details saved in: 'mem.db'
====================================================================================================
{'art_out': 'placeholder_1_416432_13_1750228854_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_416432_13_1750228854_stage1_stage2.root', '-n', '-1', '-e', '416432:13:1', '-o', 'placeholder_1_416432_13_1750228854_stage1_stage2_stage3.root']
ld_preload /usr/libexec/coreutils/libstdbuf.so
Stdout:
Begin processing the 1st record. run: 416432 subRun: 13 event: 1 at 18-Jun-2025 07:52:12 BST
Larwirecell::SimDepoSource got 1068684 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 416432 subRun: 13 event: 2 at 18-Jun-2025 08:02:27 BST
Larwirecell::SimDepoSource got 1027056 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 416432 subRun: 13 event: 3 at 18-Jun-2025 08:11:16 BST
Larwirecell::SimDepoSource got 1080871 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 4th record. run: 416432 subRun: 13 event: 4 at 18-Jun-2025 08:19:40 BST
Larwirecell::SimDepoSource got 1044931 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Stderr:
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
18-Jun-2025 07:52:11 BST Initiating request to open input file "placeholder_1_416432_13_1750228854_stage1_stage2.root"
18-Jun-2025 07:52:11 BST Opened input file "placeholder_1_416432_13_1750228854_stage1_stage2.root"
SimDepoSource got 1068684 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1068684 depos spanning: [-3286.94, 3072.44]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
18-Jun-2025 08:01:06 BST Opened output file with pattern "placeholder_1_416432_13_1750228854_stage1_stage2_stage3.root"
SimDepoSource got 1027056 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1027056 depos spanning: [-3318.56, 3122.17]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1080871 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1080871 depos spanning: [-3209.03, 3095.25]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1044931 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1044931 depos spanning: [-3066.03, 3076.78]us
Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
18-Jun-2025 07:52:11 BST Initiating request to open input file "placeholder_1_416432_13_1750228854_stage1_stage2.root"
18-Jun-2025 07:52:11 BST Opened input file "placeholder_1_416432_13_1750228854_stage1_stage2.root"
SimDepoSource got 1068684 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1068684 depos spanning: [-3286.94, 3072.44]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
18-Jun-2025 08:01:06 BST Opened output file with pattern "placeholder_1_416432_13_1750228854_stage1_stage2_stage3.root"
SimDepoSource got 1027056 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1027056 depos spanning: [-3318.56, 3122.17]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1080871 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1080871 depos spanning: [-3209.03, 3095.25]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1044931 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1044931 depos spanning: [-3066.03, 3076.78]us
Error running. Exiting with 247