Jobsub ID 398605.142@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 398605.142@justin-prod-sched01.dune.hep.ac.uk |
| Workflow ID | 6960 |
| Stage ID | 1 |
| User name | calcuttj@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 8387559424 (7999 MiB) |
| Wall seconds limit | 80000 (22 hours) |
| Submitted time | 2025-05-15 12:41:28 |
| Site | US_FNAL-FermiGrid |
| Entry | FNAL_GPGrid_ce04_mcore_op_duneonly |
| Last heartbeat | 2025-05-15 15:05:56 |
| From worker node | Hostname | dunegli-5190660-0-fnpc23105.fnal.gov |
| cpuinfo | AMD EPYC 9354 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 8387559424 (7999 MiB) |
| Wall seconds limit | 172800 (48 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | outputting_failed |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2025-05-15 13:44:30 |
| Input files | monte-carlo-006960-006643
|
| Jobscript | Exit code | 247 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-05-15 15:05:56 |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 26.3057 31.1792 35.3478 33.3276 3.73399 5
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000541416 0.00122056 0.00166523 0.00151533 0.000467996 5
simulate:wclsnfspperfect:WireCellToolkit 26.1741 30.8988 35.0035 33.0055 3.65722 5
[art]:TriggerResults:TriggerResultInserter 2.7852e-05 5.21612e-05 0.000121425 3.4833e-05 3.5153e-05 5
end_path:out1:RootOutput 4.537e-06 1.19362e-05 3.2539e-05 7.011e-06 1.03937e-05 5
end_path:out1:RootOutput(write) 0.127819 0.276516 0.356011 0.31824 0.084158 5
================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 5120.77 MB
Peak resident set size usage (VmHWM): 3501.31 MB
Details saved in: 'mem.db'
====================================================================================================
{'art_out': 'placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root'}
stage5
Running stage5
['lar', '-c', 'run_wirecell_bad_apa1.fcl', 'placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root', '-n', '-1', '-o', 'placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4_stage5.root']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 14:28:44 UTC
Larwirecell::SimDepoSource got 1124804 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 14:36:40 UTC
Larwirecell::SimDepoSource got 1292994 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 14:45:45 UTC
Larwirecell::SimDepoSource got 1267796 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 14:54:46 UTC
Larwirecell::SimDepoSource got 609154 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 14:58:59 UTC
Larwirecell::SimDepoSource got 976668 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Stderr:
The following paths have not been enabled for execution and will be ignored:
analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 14:28:44 UTC Initiating request to open input file "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root"
15-May-2025 14:28:44 UTC Opened input file "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root"
SimDepoSource got 1124804 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1124804 depos spanning: [-3269.51, 3113.54]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 14:36:30 UTC Opened output file with pattern "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4_stage5.root"
SimDepoSource got 1292994 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1292994 depos spanning: [-3227.06, 2916.36]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1267796 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1267796 depos spanning: [-3274.57, 3066.25]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 609154 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 609154 depos spanning: [-3101.71, 3108.57]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 976668 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 976668 depos spanning: [-3265.14, 3074.68]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
Error in processing stage5
The following paths have not been enabled for execution and will be ignored:
analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 14:28:44 UTC Initiating request to open input file "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root"
15-May-2025 14:28:44 UTC Opened input file "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4.root"
SimDepoSource got 1124804 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1124804 depos spanning: [-3269.51, 3113.54]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 14:36:30 UTC Opened output file with pattern "placeholder_1_398605_142_1747316677_stage1_stage2_stage3_stage4_stage5.root"
SimDepoSource got 1292994 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1292994 depos spanning: [-3227.06, 2916.36]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1267796 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1267796 depos spanning: [-3274.57, 3066.25]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 609154 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 609154 depos spanning: [-3101.71, 3108.57]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 976668 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 976668 depos spanning: [-3265.14, 3074.68]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
Error running. Exiting with 247 