Jobsub ID 398604.149@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID	398604.149@justin-prod-sched01.dune.hep.ac.uk
Workflow ID	6960
Stage ID	1
User name	calcuttj@fnal.gov
HTCondor Group	group_dune
Requested	Processors	1
	GPU	No
	RSS bytes	8387559424 (7999 MiB)
	Wall seconds limit	80000 (22 hours)
Submitted time	2025-05-15 12:40:23
Site	UK_Durham
Entry	DUNE_UK_SGridDurham_ce3
Last heartbeat	2025-05-15 15:08:40
From worker node	Hostname	n219.dur.scotgrid.ac.uk
	cpuinfo	Intel(R) Xeon(R) Gold 5220 CPU @ 2.20GHz
	OS release	Scientific Linux release 7.9 (Nitrogen)
	Processors	1
	RSS bytes	8387559424 (7999 MiB)
	Wall seconds limit	171000 (47 hours)
	GPU
	Inner Apptainer?	True
Job state	outputting_failed
Allocator name	justin-allocator-pro.dune.hep.ac.uk
Started	2025-05-15 13:36:38
Input files	monte-carlo-006960-004778
Jobscript	Exit code	0
	Real time	1h (5509s)
	CPU time	1h (5466s = 99%)
	Max RSS bytes	12593053696 (12009 MiB)
Outputting started	2025-05-15 15:08:27
Output files
Finished	2025-05-15 15:08:40
List job events Wrapper job log
Jobscript log (last 10,000 characters)

to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
15-May-2025 16:02:15 BST  Initiating request to open input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5.root"
15-May-2025 16:02:16 BST  Opened input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 131182 traces, 131182 summary
Retagger: tagging trace set: gauss with 103961 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 103961 traces tagged "gauss"
FrameSaver: q=3.05023e+06 n=1591840 tag=gauss
wclsFrameSaver: saving 131182 traces tagged "wiener"
FrameSaver: q=3.43266e+06 n=1448931 tag=wiener
15-May-2025 16:03:17 BST  Opened output file with pattern "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 86575 traces, 86575 summary
Retagger: tagging trace set: gauss with 73302 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 73302 traces tagged "gauss"
FrameSaver: q=2.00763e+06 n=1096363 tag=gauss
wclsFrameSaver: saving 86575 traces tagged "wiener"
FrameSaver: q=2.2433e+06 n=1031802 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 84283 traces, 84283 summary
Retagger: tagging trace set: gauss with 70440 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 70440 traces tagged "gauss"
FrameSaver: q=1.66811e+06 n=1005808 tag=gauss
wclsFrameSaver: saving 84283 traces tagged "wiener"
FrameSaver: q=1.85877e+06 n=912295 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 89874 traces, 89874 summary
Retagger: tagging trace set: gauss with 71869 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 71869 traces tagged "gauss"
FrameSaver: q=1.95958e+06 n=1021347 tag=gauss
wclsFrameSaver: saving 89874 traces tagged "wiener"
FrameSaver: q=2.22581e+06 n=931675 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 84418 traces, 84418 summary
Retagger: tagging trace set: gauss with 69414 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 69414 traces tagged "gauss"
FrameSaver: q=1.89178e+06 n=974099 tag=gauss
wclsFrameSaver: saving 84418 traces tagged "wiener"
FrameSaver: q=2.12376e+06 n=894385 tag=wiener
15-May-2025 16:07:16 BST  Closed output file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 16:07:16 BST  Closed input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      52.5404       54.1957       57.0223       53.795        1.65314         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                         0.0005152    0.00101391    0.00192306    0.000937396   0.000484502       5     
simulate:wclsnfspbadapa1:WireCellToolkit        52.2035       53.8159       56.6899       53.4495       1.64514         5     
[art]:TriggerResults:TriggerResultInserter    3.0022e-05    4.26436e-05   8.0196e-05    3.4154e-05    1.89592e-05       5     
end_path:out1:RootOutput                       8.278e-06    1.2063e-05    2.3999e-05     9.316e-06    5.98609e-06       5     
end_path:out1:RootOutput(write)                0.328995      0.376131      0.516455      0.341527      0.0709727        5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 5477.81 MB
  Peak resident set size usage (VmHWM): 3863.38 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root'}
extract
Running extract
['lar', '-c', 'run_extract_wire.fcl', 'placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root', '-n', '-1']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 16:07:43 BST
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 16:07:53 BST
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 16:08:01 BST
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 16:08:09 BST
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 16:08:18 BST
Art has completed and will exit with status 0.

Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
15-May-2025 16:07:42 BST  Initiating request to open input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 16:07:43 BST  Opened input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root"
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
15-May-2025 16:08:26 BST  Closed input file "placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6.root"

======================================================================================================================
TimeTracker printout (sec)              Min           Avg           Max         Median          RMS         nEvts   
======================================================================================================================
Full event                            3.17215       3.69663       4.53035       3.63026      0.509894         5     
----------------------------------------------------------------------------------------------------------------------
source:RootInput(read)              0.000494813   0.000846729    0.0013227    0.000818711   0.000314953       5     
end_path:extractwire:ExtractWire      3.17062       3.69548       4.52908       3.62924      0.509834         5     
======================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3688.53 MB
  Peak resident set size usage (VmHWM): 2833.47 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_398604_149_1747316204_stage1_stage2_stage3_stage4_stage5_stage6_extract.root', 'start_time': 1747321637.4929473, 'end_time': 1747321707.3752575}
extracted_wires_r00001_s00000.h5