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21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.

Jobsub ID 398482.47@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID398482.47@justin-prod-sched01.dune.hep.ac.uk
Workflow ID6960
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-05-15 06:36:29
SiteUS_FNAL-FermiGrid
EntryFNAL_GPGrid_ce03_mcore_op_duneonly
Last heartbeat2025-05-15 07:44:00
From worker nodeHostnamedunegli-5015397-0-fnpc17131.fnal.gov
cpuinfoIntel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit172800 (48 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-15 06:53:58
Input filesmonte-carlo-006960-003093
JobscriptExit code247
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-05-15 07:43:58
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

=================================================================================
Full event                                      6.33337       8.29781       10.0627       8.38007       1.27426         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000158569   0.000343276   0.000644584   0.000169668   0.000221507       5     
simulate:IonAndScint:IonAndScint                1.20037       1.53234       2.01683       1.50533      0.273535         5     
simulate:IonAndScintExternal:IonAndScint       0.0011476    0.00223322    0.00341589    0.00221075    0.000735627       5     
[art]:TriggerResults:TriggerResultInserter    1.0877e-05    1.96678e-05   4.7368e-05    1.2133e-05    1.39859e-05       5     
end_path:out1:RootOutput                       2.94e-06     6.1514e-06     1.793e-05     3.336e-06    5.89126e-06       5     
end_path:out1:RootOutput(write)                 5.13135       6.76244       8.04151       6.87126       1.01832         5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4808.24 MB
  Peak resident set size usage (VmHWM): 3817.52 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_398482_47_1747292047_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_398482_47_1747292047_stage1_stage2.root', '-n', '-1', '-o', 'placeholder_1_398482_47_1747292047_stage1_stage2_stage3.root']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 06:59:38 UTC
Larwirecell::SimDepoSource got 1047657 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 07:09:03 UTC
Larwirecell::SimDepoSource got 1312951 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 07:20:44 UTC
Larwirecell::SimDepoSource got 1117926 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 07:30:21 UTC
Larwirecell::SimDepoSource got 890307 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 07:38:28 UTC
Larwirecell::SimDepoSource got 1009375 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'

Stderr:
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 06:59:38 UTC  Initiating request to open input file "placeholder_1_398482_47_1747292047_stage1_stage2.root"
15-May-2025 06:59:38 UTC  Opened input file "placeholder_1_398482_47_1747292047_stage1_stage2.root"
SimDepoSource got 1047657 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1047657 depos spanning: [-3294.47, 3035.09]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 07:08:33 UTC  Opened output file with pattern "placeholder_1_398482_47_1747292047_stage1_stage2_stage3.root"
SimDepoSource got 1312951 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1312951 depos spanning: [-3289.97, 2998.18]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1117926 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1117926 depos spanning: [-3263.02, 9193.24]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 890307 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 890307 depos spanning: [-3315.44, 2918.11]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1009375 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1009375 depos spanning: [-3131.99, 3051.18]us

Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 06:59:38 UTC  Initiating request to open input file "placeholder_1_398482_47_1747292047_stage1_stage2.root"
15-May-2025 06:59:38 UTC  Opened input file "placeholder_1_398482_47_1747292047_stage1_stage2.root"
SimDepoSource got 1047657 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1047657 depos spanning: [-3294.47, 3035.09]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 07:08:33 UTC  Opened output file with pattern "placeholder_1_398482_47_1747292047_stage1_stage2_stage3.root"
SimDepoSource got 1312951 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1312951 depos spanning: [-3289.97, 2998.18]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1117926 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1117926 depos spanning: [-3263.02, 9193.24]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 890307 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 890307 depos spanning: [-3315.44, 2918.11]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1009375 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1009375 depos spanning: [-3131.99, 3051.18]us

Error running. Exiting with 247
justIN time: 2025-08-15 01:25:23 UTC       justIN version: 01.03.02