21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.
Jobsub ID 398385.46@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 398385.46@justin-prod-sched01.dune.hep.ac.uk | |
| Workflow ID | 6960 | |
| Stage ID | 1 | |
| User name | calcuttj@fnal.gov | |
| HTCondor Group | group_dune | |
| Requested | Processors | 1 |
| GPU | No | |
| RSS bytes | 8387559424 (7999 MiB) | |
| Wall seconds limit | 80000 (22 hours) | |
| Submitted time | 2025-05-15 04:30:36 | |
| Site | US_FNAL-FermiGrid | |
| Entry | FNAL_GPGrid_ce03_mcore_op_duneonly | |
| Last heartbeat | 2025-05-15 05:44:59 | |
| From worker node | Hostname | dunegli-5018835-0-fnpc9076.fnal.gov |
| cpuinfo | Intel(R) Xeon(R) CPU E5-2680 v4 @ 2.40GHz | |
| OS release | Scientific Linux release 7.9 (Nitrogen) | |
| Processors | 1 | |
| RSS bytes | 8387559424 (7999 MiB) | |
| Wall seconds limit | 172800 (48 hours) | |
| GPU | ||
| Inner Apptainer? | True | |
| Job state | outputting_failed | |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk | |
| Started | 2025-05-15 05:04:28 | |
| Input files | monte-carlo-006960-003063 | |
| Jobscript | Exit code | 247 |
| Real time | 0m (0s) | |
| CPU time | 0m (0s = 0%) | |
| Max RSS bytes | 0 (0 MiB) | |
| Outputting started | ||
| Output files | ||
| Finished | 2025-05-15 05:44:59 | |
| List job events Wrapper job log | ||
Jobscript log (last 10,000 characters)
xelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
15-May-2025 05:12:22 UTC Initiating request to open input file "placeholder_1_398385_46_1747285550_stage1.root"
15-May-2025 05:12:22 UTC Opened input file "placeholder_1_398385_46_1747285550_stage1.root"
15-May-2025 05:12:35 UTC Opened output file with pattern "placeholder_1_398385_46_1747285550_stage1_stage2.root"
15-May-2025 05:18:53 UTC Closed output file "placeholder_1_398385_46_1747285550_stage1_stage2.root"
15-May-2025 05:18:53 UTC Closed input file "placeholder_1_398385_46_1747285550_stage1.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 26.9294 38.4252 53.1099 38.7418 10.0682 5
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000181158 0.000313432 0.000544701 0.000286519 0.000133766 5
simulate:IonAndScint:IonAndScint 1.29873 1.72276 2.43148 1.55896 0.411885 5
simulate:IonAndScintExternal:IonAndScint 0.00081425 0.00234234 0.00443865 0.00235798 0.00130866 5
[art]:TriggerResults:TriggerResultInserter 1.1244e-05 2.25732e-05 6.2164e-05 1.3419e-05 1.98192e-05 5
end_path:out1:RootOutput 3.264e-06 7.6176e-06 2.4121e-05 3.501e-06 8.25296e-06 5
end_path:out1:RootOutput(write) 25.6292 36.6993 50.672 37.3347 9.83466 5
================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 4656.5 MB
Peak resident set size usage (VmHWM): 3641.47 MB
Details saved in: 'mem.db'
====================================================================================================
{'art_out': 'placeholder_1_398385_46_1747285550_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_398385_46_1747285550_stage1_stage2.root', '-n', '-1', '-o', 'placeholder_1_398385_46_1747285550_stage1_stage2_stage3.root']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 05:20:21 UTC
Larwirecell::SimDepoSource got 930365 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 05:28:26 UTC
Larwirecell::SimDepoSource got 993550 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 05:35:39 UTC
Larwirecell::SimDepoSource got 1183379 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Stderr:
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 05:20:20 UTC Initiating request to open input file "placeholder_1_398385_46_1747285550_stage1_stage2.root"
15-May-2025 05:20:21 UTC Opened input file "placeholder_1_398385_46_1747285550_stage1_stage2.root"
SimDepoSource got 930365 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 930365 depos spanning: [-3243.26, 3108.05]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 05:27:34 UTC Opened output file with pattern "placeholder_1_398385_46_1747285550_stage1_stage2_stage3.root"
SimDepoSource got 993550 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 993550 depos spanning: [-3267.08, 3110.63]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1183379 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1183379 depos spanning: [-3321.99, 3083.34]us
Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 05:20:20 UTC Initiating request to open input file "placeholder_1_398385_46_1747285550_stage1_stage2.root"
15-May-2025 05:20:21 UTC Opened input file "placeholder_1_398385_46_1747285550_stage1_stage2.root"
SimDepoSource got 930365 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 930365 depos spanning: [-3243.26, 3108.05]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 05:27:34 UTC Opened output file with pattern "placeholder_1_398385_46_1747285550_stage1_stage2_stage3.root"
SimDepoSource got 993550 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 993550 depos spanning: [-3267.08, 3110.63]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1183379 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1183379 depos spanning: [-3321.99, 3083.34]us
Error running. Exiting with 247