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Jobsub ID 398109.0@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID398109.0@justin-prod-sched01.dune.hep.ac.uk
Workflow ID6955
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-05-14 15:09:27
SiteNL_SURFsara
EntryDUNE_SurfSARA_arc01
Last heartbeat2025-05-14 15:20:42
From worker nodeHostnamewn-da-09.gina.surf.nl
cpuinfoAMD EPYC 7702P 64-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4193255424 (3999 MiB)
Wall seconds limit129600 (36 hours)
GPU
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-14 15:10:42
Input filesvd-protodune:np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131.hdf5
JobscriptExit code0
Real time7m (476s)
CPU time3m (215s = 45%)
Max RSS bytes929386496 (886 MiB)
Outputting started2025-05-14 15:18:38
Output filesvd-protodune-det-reco:np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup.root
Finished2025-05-14 15:20:36
Saved logsjustin-logs:398109.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

g/products/lareventdisplay/v10_00_15/slf7.x86_64.e26.prof/lib
PPFX_VERSION=v02_20_05
NUG4_VERSION=v1_16_08
SETUP_LARDATAALG=lardataalg v10_00_06 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
LARCOREALG_INC=/cvmfs/larsoft.opensciencegrid.org/products/larcorealg/v10_00_02/include
G4PARTICLEHPDATA=/cvmfs/larsoft.opensciencegrid.org/products/g4tendl/v1_3_2/G4TENDL1.3.2
SETUP_LARANA=larana v10_00_16 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_LARSOFT=larsoft v10_06_00 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_CETLIB=cetlib v3_18_02 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_FHICLCPP=fhiclcpp v4_18_04 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
OPENBLAS_INC=/cvmfs/larsoft.opensciencegrid.org/products/openblas/v0_3_23/Linux64bit+3.10-2.17-e26/include
PYTHON_INCLUDE=/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/include/python3.9
_=/usr/bin/env
Will use justin-get-file
pfn: root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/vd-protodune/28/35/np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131.hdf5
did: vd-protodune:np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131.hdf5
Running reco stage1
The following paths have not been enabled for execution and will be ignored:
  read_tpc
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  emtrkmichelid
  gaushit
  hitpdune
  nhitsfilter
  opflash
  opslicer
  pandora
  pandoraGnocalo
  pandoraShower
  pandoraStdcalo
  pandoraTrack
  pandoraWriter
  pandoracalipid
  pandorapid
  reco3d
  rns
  wclsdatavd
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_06_00d01/gdml/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16451 nodes/ 2412 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa0) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa1) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa2) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa3) has 3072 channels from 3/3 readout planes.
DAPHNE Channel Map: Building DAPHNE channel map from file PDVD_PDS_Mapping_v05092025.json
PDSP Channel Map: Building RCE TPC wiremap from file protoDUNETPCChannelMap_RCE_v4.txt
PDSP Channel Map: Building FELIX TPC wiremap from file protoDUNETPCChannelMap_RCE_v4.txt
PDSP Channel Map: Building SSP channel map from file protoDUNESSPChannelMap_v1.txt
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
TPC Channel Map: Building TPC wiremap from file PD2VDBottomTPCChannelMap_v1.txt
db: runtime1747222890
14-May-2025 17:11:24 CEST  Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
14-May-2025 17:18:25 CEST  Closed output file "np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup.root"

==================================================================================================================================
TimeTracker printout (sec)                          Min           Avg           Max         Median          RMS         nEvts   
==================================================================================================================================
Full event                                        8.47104       9.45907       16.7201       8.98309       1.51792        44     
----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                      1.9517e-05    2.55202e-05   0.000150548   2.16515e-05   1.93703e-05      44     
produce:tpcrawdecoder:PDVDTPCReader               6.12652       7.14919       14.4067       6.66252       1.51144        44     
produce:triggerrawdecoder:PDVDTriggerReader4     0.294756      0.339994      0.510445      0.310858      0.0604303       44     
produce:pdhddaphne:DAPHNEReaderPDHD             0.00022037    0.000257762    0.0005624    0.000248444   5.0322e-05       44     
produce:ophit:OpHitFinder                       8.9511e-05    0.000121654   0.000749066   9.85925e-05   0.000100507      44     
[art]:TriggerResults:TriggerResultInserter       9.91e-06     1.15707e-05   3.7422e-05    1.0905e-05    4.00997e-06      44     
end_path:out1:RootOutput                         3.076e-06    3.9607e-06     1.522e-05    3.6715e-06    1.7473e-06       44     
end_path:out1:RootOutput(write)                   1.91509       1.96883       2.08258       1.96309      0.0280439       44     
==================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 1685.02 MB
  Peak resident set size usage (VmHWM): 929.386 MB
  Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup.root
\tHists: np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup.root
Ran successfully
{
  "name": "np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup.root",
  "namespace": "vd-protodune-det-reco",
  "metadata": {
    "core.file_format": "artroot",
    "core.application.name": "reco",
    "core.application.family": "dunesw",
    "core.application.version": "v10_06_00d01",
    "core.data_tier": "full-reconstructed",
    "dune.config_file": "standard_reco_stage1_protodunevd_keepup.fcl",
    "dune.campaign": "vd-protodune-reco-keepup-v0",
    "core.start_time": 1747235905.0,
    "core.end_time": 1747235905.0,
    "core.events": [
      397,
      398,
      399,
      400,
      401,
      402,
      403,
      404,
      405,
      406,
      407,
      408,
      409,
      410,
      411,
      412,
      413,
      414,
      415,
      416,
      417,
      418,
      419,
      420,
      421,
      422,
      423,
      424,
      425,
      426,
      427,
      428,
      429,
      430,
      431,
      432,
      433,
      434,
      435,
      436,
      437,
      438,
      439,
      440
    ],
    "core.event_count": 44,
    "core.first_event_number": 397,
    "core.last_event_number": 440,
    "core.data_stream": "cosmics",
    "core.file_content_status": "good",
    "core.file_type": "detector",
    "core.run_type": "vd-protodune",
    "core.runs": [
      36464
    ],
    "core.runs_subruns": [
      3646400001
    ],
    "dune.daq_test": true,
    "retention.status": "active",
    "retention.class": "physics"
  },
  "parents": [
    {
      "did": "vd-protodune:np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131.hdf5"
    }
  ]
}Forming hist metadata
formed
{
  "name": "np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131_reco_stage1_20250514T151825_keepup_hists.root",
  "namespace": "vd-protodune-det-reco",
  "metadata": {
    "core.file_format": "root",
    "core.application.name": "reco",
    "core.application.family": "dunesw",
    "core.application.version": "v10_06_00d01",
    "core.data_tier": "root-tuple-virtual",
    "dune.config_file": "standard_reco_stage1_protodunevd_keepup.fcl",
    "dune.campaign": "vd-protodune-reco-keepup-v0",
    "core.start_time": 1747235905.0,
    "core.end_time": 1747235905.0,
    "core.data_stream": "cosmics",
    "core.file_content_status": "good",
    "core.file_type": "detector",
    "core.run_type": "vd-protodune",
    "core.runs": [
      36464
    ],
    "core.runs_subruns": [
      3646400001
    ],
    "dune.daq_test": true,
    "retention.status": "active",
    "retention.class": "physics"
  },
  "parents": [
    {
      "did": "vd-protodune:np02vd_raw_run036464_0009_df-s04-d0_dw_0_20250514T114131.hdf5"
    }
  ]
}
justIN time: 2025-05-20 05:19:03 UTC       justIN version: 01.03.01