Jobsub ID 396985.0@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 396985.0@justin-prod-sched01.dune.hep.ac.uk |
| Workflow Testing | Yes |
| Workflow ID | 1 |
| Stage ID | 1 |
| User name | amcnab@fnal.gov |
| HTCondor Group | group_dune.prod_mcsim |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 3600 (1 hours) |
| Submitted time | 2025-05-12 18:07:51 |
| Site | UK_Glasgow |
| Entry | CLAS12_T3_UK_ScotGrid_GLA_ce04_scitok |
| Last heartbeat | 2025-05-12 20:09:40 |
| From worker node | Hostname | wn-d20-028.beowulf.cluster |
| cpuinfo | AMD EPYC 7452 32-Core Processor |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 1073741824 (1024 MiB) |
| Wall seconds limit | 171000 (47 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | finished |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2025-05-12 20:04:00 |
| Input files | |
| Jobscript | Exit code | 0 |
| Real time | 4m (245s) |
| CPU time | 0m (33s = 13%) |
| Max RSS bytes | 60862464 (58 MiB) |
| Outputting started | 2025-05-12 20:08:12 |
| Output files | |
| Finished | 2025-05-12 20:09:40 |
| Saved logs | justin-logs:396985.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
onException
DEBUG:dogpile.lock:no value, waiting for create lock
DEBUG:dogpile.lock:value creation lock <dogpile.cache.region.CacheRegion._LockWrapper object at 0x146dec3002b0> acquired
DEBUG:dogpile.cache.region:No value present for key: "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Calling creation function for not-yet-present value
DEBUG:dogpile.cache.region:Cache value generated in 0.000 seconds for key(s): "host_to_choose_choice['https://dune-rucio.fnal.gov']"
DEBUG:dogpile.lock:Released creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=T3_US_NERSC HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC HTTP/1.1" 200 1240
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1747080246-NsABuCaZII
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC/attr/ HTTP/1.1" 200 139
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 779
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202519
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202519 HTTP/1.1" 409 104
INFO:root:Dataset testpro:awt-uploads-202519 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1747080246-NsABuCaZII/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at T3_US_NERSC
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:Checking if davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII exists
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:[{'hostname': 'dtn14.nersc.gov', 'scheme': 'root', 'port': 1094, 'prefix': '//global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 10, 'write': 10, 'delete': 10}, 'wan': {'read': 10, 'write': 10, 'delete': 10, 'third_party_copy_read': 0, 'third_party_copy_write': 0}}, 'extended_attributes': None}, {'hostname': 'dtn14.nersc.gov', 'scheme': 'davs', 'port': 1094, 'prefix': '/global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 1, 'write': 1, 'delete': 1}, 'wan': {'read': 1, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}]
INFO:root:Trying upload with davs to T3_US_NERSC
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.NoRename: uploading file from awt-1747080246-NsABuCaZII to davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
INFO:root:Successful upload of temporary file. davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:gfal.NoRename: getting stats of file davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/ae/39/awt-1747080246-NsABuCaZII
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=5fce0701 Found=5fce0701
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1747080246-NsABuCaZII
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v37_1_0_post1/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202519/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202519/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202519 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse T3_US_NERSC --protocol davs --scope testpro --dataset awt-uploads-202519 awt-1747080246-NsABuCaZII --timeout 1200' returns 0
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1528843534/CN=174708024082
issuer : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1528843534
identity : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1528843534
type : RFC compliant proxy
strength : 2048 bits
path : /home/awt-proxy.pem
timeleft : 167:55:54
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO : dune
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft : 54:59:58
uri : voms1.fnal.gov:15042
===== Results =====
Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
echo '{"namespace":"testpro","name":"FILENAME","size":0}' >tmp.json
metacat file declare --json -f tmp.json "dune:all"
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset awt-uploads-202519 --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands
Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== UK_Glasgow DUNE_CA_SFU 0 0 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_IT_INFN_CNAF 0 0 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_UK_GLASGOW 0 0 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_UK_MANCHESTER_CEPH 0 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow QMUL 0 0 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow SURFSARA 0 0 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== UK_Glasgow T3_US_NERSC 0 0 root://dtn14.nersc.gov:1094//global/cfs/cdirs/m3249/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs 