Jobsub ID 389299.0@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 389299.0@justin-prod-sched01.dune.hep.ac.uk |
| Workflow ID | 6592 |
| Stage ID | 1 |
| User name | chasnip@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| GPU | No |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 80000 (22 hours) |
| Submitted time | 2025-05-02 15:38:43 |
| Site | UK_Edinburgh |
| Entry | DUNE_UK_SGridECDF_ce1 |
| Last heartbeat | 2025-05-02 17:01:02 |
| From worker node | Hostname | node2b07.ecdf.ed.ac.uk |
| cpuinfo | Intel(R) Xeon(R) Gold 6338 CPU @ 2.00GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 171000 (47 hours) |
| GPU | |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2025-05-02 15:40:21 |
| Input files | monte-carlo-006592-000002
|
| Jobscript | Exit code | 66 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Max RSS bytes | 0 (0 MiB) |
| Outputting started | |
| Output files | |
| Finished | 2025-05-02 17:01:02 |
| Saved logs | justin-logs:389299.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
<TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25610 nodes/ 5537 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
59+1 records in
59+1 records out
31168512 bytes (31 MB) copied, 25.3905 s, 1.2 MB/s
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:41:34 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 7 ...
Fri May 2 16:41:41 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:42:04 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 42 ...
Fri May 2 16:42:46 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:43:09 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 44 ...
Fri May 2 16:43:53 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:44:18 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 126 ...
Fri May 2 16:46:24 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:46:46 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 374 ...
Fri May 2 16:53:00 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:53:23 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 105 ...
Fri May 2 16:55:08 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:55:32 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 1446 ...
Fri May 2 17:19:38 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 17:20:03 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 2417 ...
Fri May 2 18:00:20 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Error in processing gen
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_05_00d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25610 nodes/ 5537 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
59+1 records in
59+1 records out
31168512 bytes (31 MB) copied, 25.3905 s, 1.2 MB/s
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:41:34 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 7 ...
Fri May 2 16:41:41 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:42:04 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 42 ...
Fri May 2 16:42:46 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:43:09 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 44 ...
Fri May 2 16:43:53 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:44:18 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 126 ...
Fri May 2 16:46:24 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:46:46 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 374 ...
Fri May 2 16:53:00 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:53:23 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 105 ...
Fri May 2 16:55:08 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 16:55:32 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 1446 ...
Fri May 2 17:19:38 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Fri May 2 17:20:03 2025
program: dd bs=512k if=/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db of=/var/tmp/ifdh_1733104_0/He_showers_310064.dbexited status 1
delaying 2417 ...
Fri May 2 18:00:20 2025
retrying...
dd: failed to open '/cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/Cosmics/CERN/CORSIKA/standard/He_showers_310064.db': Input/output error
Error running. Exiting with 66
