Jobsub ID 358366.0@justin-prod-sched01.dune.hep.ac.uk
Jobsub ID | 358366.0@justin-prod-sched01.dune.hep.ac.uk |
Workflow Testing | Yes |
Workflow ID | 1 |
Stage ID | 1 |
User name | amcnab@fnal.gov |
HTCondor Group | group_dune.prod_mcsim |
Requested | Processors | 1 |
GPU | No |
RSS bytes | 1073741824 (1024 MiB) |
Wall seconds limit | 3600 (1 hours) |
Submitted time | 2025-03-28 03:52:28 |
Site | NL_NIKHEF |
Entry | VIRGO_NL_NIKHEF_brug_multicore |
Last heartbeat | 2025-03-28 04:36:59 |
From worker node | Hostname | wn-lot-022.farm.nikhef.nl |
cpuinfo | AMD EPYC 7702P 64-Core Processor |
OS release | Scientific Linux release 7.9 (Nitrogen) |
Processors | 1 |
RSS bytes | 1073741824 (1024 MiB) |
Wall seconds limit | 129600 (36 hours) |
GPU | |
Inner Apptainer? | True |
Job state | finished |
Allocator name | justin-allocator-pro.dune.hep.ac.uk |
Started | 2025-03-28 03:53:53 |
Input files | |
Jobscript | Exit code | 0 |
Real time | 42m (2567s) |
CPU time | 0m (26s = 1%) |
Max RSS bytes | 66101248 (63 MiB) |
Outputting started | 2025-03-28 04:36:41 |
Output files | |
Finished | 2025-03-28 04:36:59 |
Saved logs | justin-logs:358366.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz |
List job events Wrapper job log |
Jobscript log (last 10,000 characters)
sed creation lock
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/?expression=T3_US_NERSC HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC HTTP/1.1" 200 1240
DEBUG:root:Input validation done.
INFO:root:Preparing upload for file awt-1743134036-zQFqG2zTAu
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /rses/T3_US_NERSC/attr/ HTTP/1.1" 200 139
DEBUG:root:wan domain is used for the upload
DEBUG:root:Registering file
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /accounts/dunepro/scopes/ HTTP/1.1" 200 779
DEBUG:root:Trying to create dataset: testpro:awt-uploads-202512
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202512 HTTP/1.1" 409 104
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
INFO:root:Dataset testpro:awt-uploads-202512 already exists - no rule will be created
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-1743134036-zQFqG2zTAu/meta?plugin=DID_COLUMN HTTP/1.1" 404 129
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:charset_normalizer:Encoding detection: ascii is most likely the one.
DEBUG:root:File DID does not exist
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas HTTP/1.1" 201 7
INFO:root:Successfully added replica in Rucio catalogue at T3_US_NERSC
DEBUG:rucio.rse.protocols.protocol:PFN2LFN function will not be fetched from the policy package
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:gfal.NoRename: checking if file exists None
DEBUG:root:Checking if davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu exists
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:[{'hostname': 'dtn14.nersc.gov', 'scheme': 'root', 'port': 1094, 'prefix': '//global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 10, 'write': 10, 'delete': 10}, 'wan': {'read': 10, 'write': 10, 'delete': 10, 'third_party_copy_read': 0, 'third_party_copy_write': 0}}, 'extended_attributes': None}, {'hostname': 'dtn14.nersc.gov', 'scheme': 'davs', 'port': 1094, 'prefix': '/global/cfs/cdirs/m3249/dune/RSE', 'impl': 'rucio.rse.protocols.gfal.NoRename', 'domains': {'lan': {'read': 1, 'write': 1, 'delete': 1}, 'wan': {'read': 1, 'write': 1, 'delete': 1, 'third_party_copy_read': 1, 'third_party_copy_write': 1}}, 'extended_attributes': None}]
INFO:root:Trying upload with davs to T3_US_NERSC
DEBUG:root:Processing upload with the domain: wan
DEBUG:root:gfal.NoRename: connecting to storage
DEBUG:root:The PFN created from the LFN: davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:gfal.NoRename: checking if file exists davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:put: Attempt 1
DEBUG:root:gfal.NoRename: uploading file from awt-1743134036-zQFqG2zTAu to davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
INFO:root:Successful upload of temporary file. davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:skip_upload_stat=False
DEBUG:root:stat: pfn=davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:gfal.NoRename: getting stats of file davs://dtn14.nersc.gov:1094/global/cfs/cdirs/m3249/dune/RSE/testpro/66/d5/awt-1743134036-zQFqG2zTAu
DEBUG:root:Filesize: Expected=26 Found=26
DEBUG:root:Checksum: Expected=60850730 Found=60850730
DEBUG:root:gfal.NoRename: closing protocol connection
DEBUG:root:Upload done.
INFO:root:Successfully uploaded file awt-1743134036-zQFqG2zTAu
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
/cvmfs/dune.opensciencegrid.org/products/dune/rucio/v35_4_0/NULL/lib/python3.9/site-packages/urllib3/connectionpool.py:1061: InsecureRequestWarning: Unverified HTTPS request is being made to host 'dune-rucio.fnal.gov'. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/1.26.x/advanced-usage.html#ssl-warnings
warnings.warn(
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /traces/ HTTP/1.1" 404 207
DEBUG:urllib3.connectionpool:Resetting dropped connection: dune-rucio.fnal.gov
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "PUT /replicas HTTP/1.1" 200 0
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /dids/testpro/awt-uploads-202512/dids HTTP/1.1" 201 7
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "POST /replicas/list HTTP/1.1" 200 None
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): dune-rucio.fnal.gov:443
DEBUG:urllib3.connectionpool:https://dune-rucio.fnal.gov:443 "GET /dids/testpro/awt-uploads-202512/files HTTP/1.1" 200 None
--- Upload try 1/1
--- Rucio upload 1/1 returns 0
--- Replica check try 1/1
--- Dataset awt-uploads-202512 check try 1/1
--- Upload, replicas, and datasets checks passed
'justin-rucio-upload --rse T3_US_NERSC --protocol davs --scope testpro --dataset awt-uploads-202512 awt-1743134036-zQFqG2zTAu --timeout 1200' returns 0
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1557143611/CN=174313403388
issuer : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1557143611
identity : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk/CN=1557143611
type : RFC compliant proxy
strength : 2048 bits
path : /home/awt-proxy.pem
timeleft : 167:17:13
key usage : Digital Signature, Key Encipherment, Key Agreement
=== VO dune extension information ===
VO : dune
subject : /C=UK/O=eScience/OU=Manchester/L=HEP/CN=justin-jobs-production.dune.hep.ac.uk
issuer : /DC=org/DC=incommon/C=US/ST=Illinois/O=Fermi Research Alliance/CN=voms1.fnal.gov
attribute : /dune/Role=Production/Capability=NULL
attribute : /dune/Role=NULL/Capability=NULL
timeleft : 167:12:23
uri : voms1.fnal.gov:15042
===== Results =====
Download/upload commands:
xrdcp --force --nopbar --verbose $read_pfn downloaded.txt
justin-rucio-upload --rse $rse_name --protocol $write_protocol --scope testpro --dataset --timeout 1200 FILENAME
Use the wrapper job link on the page for the job on the justIN Dashboard to find the full log file, with errors from these commands
Each line: $JUSTIN_SITE_NAME $rse_name $download_retval $upload_retval $read_pfn $write_protocol
==awt== NL_NIKHEF DUNE_CA_SFU 0 0 root://lcg-dunese1.sfu.computecanada.ca:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_CERN_EOS 0 0 root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_ES_PIC 0 0 root://xrootd.pic.es:1094/pnfs/pic.es/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_FR_CCIN2P3_DISK 0 0 root://ccxrootdegee.in2p3.fr:1094/pnfs/in2p3.fr/data/dune/disk/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_IT_INFN_CNAF 0 0 root://xrootd-archive.cr.cnaf.infn.it:1096//dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_UK_GLASGOW 0 0 root://cephc02.gla.scotgrid.ac.uk:1094//cephfs/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_UK_LANCASTER_CEPH 0 0 root://xgate.hec.lancs.ac.uk:1094//cephfs/grid/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_UK_MANCHESTER_CEPH 52 0 root://meitner.tier2.hep.manchester.ac.uk:1094//cephfs/experiments/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_US_BNL_SDCC 0 0 root://dcdndoor.sdcc.bnl.gov:1094//pnfs/sdcc.bnl.gov/data/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF DUNE_US_FNAL_DISK_STAGE 0 0 root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF NIKHEF 0 0 root://dune.dcache.nikhef.nl:1094/pnfs/nikhef.nl/data/dune/generic/rucio/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF PRAGUE 0 0 root://golias100.farm.particle.cz:1094/dpm/farm.particle.cz/home/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF QMUL 0 0 root://xrootd1.esc.qmul.ac.uk:1094//dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF RAL-PP 0 0 root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF RAL_ECHO 0 0 root://xrootd.echo.stfc.ac.uk:1094/dune:/protodune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF SURFSARA 0 0 root://otter12.grid.surfsara.nl:21094/pnfs/grid.sara.nl/data/dune/disk/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs
==awt== NL_NIKHEF T3_US_NERSC 0 0 root://dtn14.nersc.gov:1094//global/cfs/cdirs/m3249/dune/RSE/testpro/bb/7f/awt-download-2023-03-07-01.txt davs