justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 358071.126@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID358071.126@justin-prod-sched01.dune.hep.ac.uk
Workflow ID5746
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes6815744000 (6500 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-03-27 11:18:03
SiteCZ_FZU
EntryNova_CZ_FZU_osgce1
Last heartbeat2025-03-27 12:33:24
From worker nodeHostnamemikan25.farm.particle.cz
cpuinfoIntel(R) Xeon(R) CPU E5-2650 v4 @ 2.20GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes6815744000 (6500 MiB)
Wall seconds limit172800 (48 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-03-27 12:22:38
Input filesmonte-carlo-005746-000054
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-03-27 12:33:24
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

:  PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 13:24:49 CET  ModuleConstruction
Instantiated HepJamesRandom engine "PDFastSim:0:photon" with seed 0.
%MSG
%MSG-i NuRandomService:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Seeding HepJamesRandom engine "PDFastSim:photon" with seed 0.
%MSG
%MSG-i RANDOM:  PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 13:24:49 CET  ModuleConstruction
Instantiated HepJamesRandom engine "PDFastSim:0:scinttime" with seed 0.
%MSG
%MSG-i NuRandomService:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Seeding HepJamesRandom engine "PDFastSim:scinttime" with seed 0.
%MSG
ScintTimeLAr Tool configure:
Fast rising time: 0, Fast decay time: 6, Slow rising time: 0, Slow decay time: 1600
%MSG-i PDFastSimPVS:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Initializing PDFastSimPVS.
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Initializing Photon propagation time model.
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Using VUV timing parameterization
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:24:49 CET ModuleConstruction
Generating VUV parameters
%MSG
%MSG-i PropagationTimeModel:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:32:08 CET ModuleConstruction
Photon propagation time model initalized.
%MSG
%MSG-i PDFastSimPVS:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:32:08 CET ModuleConstruction
Use Lite Photon.
%MSG
%MSG-i PDFastSimPVS:  PDFastSimPVS:PDFastSim@Construction  27-Mar-2025 13:32:08 CET ModuleConstruction
PDFastSimPVS Initialization finish
%MSG
27-Mar-2025 13:32:08 CET  Initiating request to open input file "prod_muon_400MeV_protodunevd_1_358071_126_1743078170_gen_g4_stage1.root"
%MSG-i Root_Information:  TriggerResultInserter:TriggerResults@Construction  TClass::Init() 27-Mar-2025 13:32:09 CET ModuleConstruction
no dictionary for class sim::IDE is available
ROOT severity: 2000
%MSG
27-Mar-2025 13:32:09 CET  Opened input file "prod_muon_400MeV_protodunevd_1_358071_126_1743078170_gen_g4_stage1.root"
IonAndScint beginJob.
Using Correlated algorithm to calculate IS.
%MSG-i ISCalcCorrelated:  IonAndScint:IonAndScint@BeginJob  27-Mar-2025 13:32:09 CET ModuleBeginJob ISCalcCorrelated.cxx:40
IonizationAndScintillation/ISCalcCorrelated Initialize.
%MSG
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 27-Mar-2025 13:32:09 CET
%MSG-w PhotonBackTrackerService:  ProcessEvent 27-Mar-2025 13:32:09 CET  run: 1 subRun: 0 event: 1
Rebuild failed to get the OpDetBTRs. This is expected when running on a generation or simulation step.
%MSG
%MSG-i NuRandomService:  IonAndScint:IonAndScint@BeginModule  27-Mar-2025 13:32:09 CET run: 1 subRun: 0 event: 1
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 461509897
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolCryostat
Skip SimEnergyDeposit in: LArG4DetectorServicevolBeamPlIINi
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActive
%MSG-i NuRandomService:  PDFastSimPVS:PDFastSim@BeginModule  27-Mar-2025 13:32:09 CET run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.photon': 359931962
%MSG
%MSG-i NuRandomService:  PDFastSimPVS:PDFastSim@BeginModule  27-Mar-2025 13:32:09 CET run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.scinttime': 533889039
%MSG
%MSG-i PhotonVisibilityService:  PDFastSimPVS:PDFastSim@BeginModule  27-Mar-2025 13:32:09 CET run: 1 subRun: 0 event: 1
PhotonVisibilityService Loading photon library from file /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root for 15625 voxels and 40 optical detectors.
%MSG
%MSG-i PhotonLibrary:  PDFastSimPVS:PDFastSim@BeginModule  27-Mar-2025 13:32:09 CET run: 1 subRun: 0 event: 1
Reading photon library from input file: /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root
%MSG
27-Mar-2025 13:32:58 CET  Opened output file with pattern "prod_muon_400MeV_protodunevd_1_358071_126_1743078170_gen_g4_stage1_g4_stage2.root"
%MSG-i FastCloning:  PDFastSimPVS:PDFastSim@BeginModule  27-Mar-2025 13:32:58 CET run: 1 subRun: 0 event: 1
Fast cloning event data products from input file.
%MSG
IonAndScint endJob.
27-Mar-2025 13:32:58 CET  Closed input file "prod_muon_400MeV_protodunevd_1_358071_126_1743078170_gen_g4_stage1.root"
Malformed TimeTracker database.  The TimeEvent table is empty, but
the TimeModule table is not.  This can happen if an exception has
been thrown from a module while processing the first event.  Any
saved database file is suspect and should not be used.
%MSG-i NuRandomService:  RootOutput:out1@EndJob 27-Mar-2025 13:32:58 CET  ModuleEndJob

Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
  algorithm version: EventTimestamp_v1
   Configured value          Last value   ModuleLabel.InstanceName
        (per event)           461509897   IonAndScint.ISCalcAlg
        (per event)           359931962   PDFastSim.photon
        (per event)           533889039   PDFastSim.scinttime

%MSG

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 1179.94 MB
  Peak resident set size usage (VmHWM): 469.725 MB
====================================================================================================

TrigReport ---------- Event summary -------------
TrigReport Events total = 1 passed = 0 failed = 1

TrigReport ---------- Modules in End-path ----------
TrigReport        Run    Success      Error Name
TrigReport          0          0          0 out1

TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 0.165124 Real = 48.691736

MemReport  ---------- Memory summary [base-10 MB] ------
MemReport  VmPeak = 1179.94 VmHWM = 469.725

%MSG-s ArtException:  PostEndJob 27-Mar-2025 13:32:58 CET ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- ScheduleExecutionFailure BEGIN
    Path: ProcessingStopped.
    ---- OtherArt BEGIN
      ---- PhotonLibrary BEGIN
        Error in ttree load, reading photon library: /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root
        The above exception was thrown while processing module PDFastSimPVS/PDFastSim run: 1 subRun: 0 event: 1
      ---- PhotonLibrary END
    ---- OtherArt END
    Exception going through path simulate
  ---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while sim::ParticleAncestryMap_largeant__G4Stage1. has 10 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.

Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/8e14053062785f80c03da35c9e53597243e9b1b5/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16499 nodes/ 2408 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).

Error in processing g4_stage2
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/8e14053062785f80c03da35c9e53597243e9b1b5/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16499 nodes/ 2408 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).

Error running. Exiting with 1
justIN time: 2025-04-03 08:29:27 UTC       justIN version: 01.03.00