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Jobsub ID 290119.0@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID290119.0@justin-prod-sched01.dune.hep.ac.uk
Workflow ID4103
Stage ID1
User nameamoor@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
RSS bytes8388608000 (8000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2024-11-15 01:09:58
SiteUK_RAL-Tier1
EntryLIGO_UK_RAL_arc_ce04
Last heartbeat2024-11-15 02:57:04
From worker nodeHostnamedune001-2910002.0-lcg2725.gridpp.rl.ac.uk
cpuinfoAMD EPYC 9654 96-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8388608000 (8000 MiB)
Wall seconds limit216000 (60 hours)
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2024-11-15 01:12:18
Input filesusertests:000852_reco_data_2024-11-14T_093508Z.root
JobscriptExit code1
Real time0m (0s)
CPU time0m (0s = 0%)
Outputting started 
Output files
Finished2024-11-15 02:57:04
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

AFM g4 jobscript.
Input PFN = root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/usertests/51/17/000852_reco_data_2024-11-14T_093508Z.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_4_3b/Linux64bit+3.10-2.17-e20-p3913-prof/lib/libXrdPosixPreload.so
=== Start last 100 lines of lar log file ===
	Brem : 280312
	conv : 45346
	Ion : 121089
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 01:58:16 UTC run: 20000031 subRun: 0 event: 847 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 01:58:16 UTC run: 20000031 subRun: 0 event: 847 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction:  larg4Main:largeant@BeginModule  15-Nov-2024 01:58:16 UTC run: 20000031 subRun: 0 event: 847 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService:  IonAndScint:IonAndScint@BeginModule  15-Nov-2024 01:58:16 UTC run: 20000031 subRun: 0 event: 847
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 212310818
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService:  SimDriftElectrons:elecDrift@BeginModule  15-Nov-2024 01:58:19 UTC run: 20000031 subRun: 0 event: 847
Random seed for this event, engine 'elecDrift': 618930817
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  15-Nov-2024 01:58:50 UTC run: 20000031 subRun: 0 event: 847
Random seed for this event, engine 'PDFastSim.photon': 166905747
%MSG
%MSG-i NuRandomService:  PDFastSimPAR:PDFastSim@BeginModule  15-Nov-2024 01:58:50 UTC run: 20000031 subRun: 0 event: 847
Random seed for this event, engine 'PDFastSim.scinttime': 512777870
%MSG
IonAndScint endJob.
15-Nov-2024 02:56:06 UTC  Closed input file "root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/usertests/51/17/000852_reco_data_2024-11-14T_093508Z.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                    0.00530293      7.24775       3497.17      0.243071       120.727        847    
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        7.1948e-05    0.000678198    0.0426173    0.000140903   0.00379222       847    
simulate:rns:RandomNumberSaver                1.4963e-05    3.17422e-05   0.000333123   2.9224e-05    1.33897e-05      847    
simulate:largeant:larg4Main                   0.00422256     0.397877       36.2221      0.207273       1.40048        847    
simulate:IonAndScint:IonAndScint              7.7507e-05    0.00588049      2.86397     0.000141644    0.0989927       847    
simulate:elecDrift:SimDriftElectrons          2.6059e-05     0.0645365      30.4807     4.4668e-05      1.06342        847    
simulate:PDFastSim:PDFastSimPAR               3.8648e-05      6.67697       3427.6      6.8233e-05      118.291        847    
[art]:TriggerResults:TriggerResultInserter     5.869e-06    1.12762e-05   4.1853e-05    1.0997e-05    3.5928e-06       847    
end_path:out1:RootOutput                       2.484e-06    4.56922e-06   2.1232e-05     4.537e-06    7.5795e-07       847    
end_path:out1:RootOutput(write)               0.000484052    0.101339       5.6656      0.00346253     0.368632        846    
================================================================================================================================
%MSG-i NuRandomService:  RootOutput:out1@EndJob 15-Nov-2024 02:56:06 UTC  ModuleEndJob

Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
  algorithm version: EventTimestamp_v1
   Configured value          Last value   ModuleLabel.InstanceName
        (per event)           212310818   IonAndScint.ISCalcAlg
        (per event)           166905747   PDFastSim.photon
        (per event)           512777870   PDFastSim.scinttime
        (per event)           618930817   elecDrift
        (per event)           173096556   largeant

%MSG

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 12202.6 MB
  Peak resident set size usage (VmHWM): 10042.1 MB
====================================================================================================

TrigReport ---------- Event summary -------------
TrigReport Events total = 847 passed = 847 failed = 0

TrigReport ---------- Modules in End-path ----------
TrigReport        Run    Success      Error Name
TrigReport        847        847          0 out1

TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 6097.194939 Real = 6173.114843

MemReport  ---------- Memory summary [base-10 MB] ------
MemReport  VmPeak = 12202.6 VmHWM = 10042.1

%MSG-s ArtException:  PostEndJob 15-Nov-2024 02:56:43 UTC ModuleEndJob
---- EventProcessorFailure BEGIN
  EventProcessor: an exception occurred during current event processing
  ---- FatalRootError BEGIN
    Fatal Root Error: TBufferFile::WriteByteCount
    bytecount too large (more than 1073741822)
    ROOT severity: 3000
  ---- FatalRootError END
---- EventProcessorFailure END
---- FatalRootError BEGIN
  Fatal Root Error: TTree::SetEntries
  Tree branches have different numbers of entries, eg EventAuxiliary has 846 entries while art::TriggerResults_TriggerResults__MUSUNGen. has 1000 entries.
  ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
lar exit code 0
Traceback (most recent call last):
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 434, in <module>
    main()
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 373, in main
    mddict = expSpecificMetadata.getmetadata()
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 344, in getmetadata
    jobt = self.get_job(proc)
  File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 69, in get_job
    raise RuntimeError('sam_metadata_dumper returned nonzero exit status {}.'.format(rc))
RuntimeError: sam_metadata_dumper returned nonzero exit status 1.
extractor_prod.py exit code 1
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
pdjson2metadata exit code 1
.:
total 2693748
-rw-r--r-- 1 dune001 dune 2755320834 Nov 15 02:56 RootOutput-6d0b-3399-9210-8b1e.root
-rw-r--r-- 1 dune001 dune    3057048 Nov 15 02:56 000852_reco_data_2024-11-14T_093508Z_reco_2024-11-15T_011221Z.log
-rw-r--r-- 1 dune001 dune       7528 Nov 15 02:56 jobscript.log
-rw-r--r-- 1 dune001 dune        519 Nov 15 02:56 g4_hist.root
-rw-r--r-- 1 dune001 dune        104 Nov 15 01:12 all-input-dids.txt
-rw-r--r-- 1 dune001 dune          0 Nov 15 02:56 000852_reco_data_2024-11-14T_093508Z_reco_data_2024-11-15T_011221Z.root.ext.json
-rw-r--r-- 1 dune001 dune          0 Nov 15 02:56 000852_reco_data_2024-11-14T_093508Z_reco_data_2024-11-15T_011221Z.root.json
justIN time: 2024-11-22 08:10:56 UTC       justIN version: 01.01.09