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Jobsub ID 285540.9@justin-prod-sched01.dune.hep.ac.uk

Jobsub ID285540.9@justin-prod-sched01.dune.hep.ac.uk
Workflow ID3976
Stage ID1
User nameosbiston@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
RSS bytes2097152000 (2000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2024-11-07 21:12:23
SiteUS_FNAL-FermiGrid
EntryFNAL_GPGrid_ce04_mcore_op_duneonly
Last heartbeat2024-11-07 21:22:46
From worker nodeHostnamedunegli-4213327-0-fnpc23112.fnal.gov
cpuinfoAMD EPYC 9354 32-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes2097152000 (2000 MiB)
Wall seconds limit172800 (48 hours)
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2024-11-07 21:22:05
Input filesfardet-vd:prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root
JobscriptExit code0
Real time0m (33s)
CPU time0m (30s = 90%)
Outputting started2024-11-07 21:22:39
Output files
Finished2024-11-07 21:22:46
Saved logsjustin-logs:285540.9-justin-prod-sched01.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

Input PFN = root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/b5/15/prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
mv: cannot stat 'Pandora_Events.pndr': No such file or directory
=== Start last 100 lines of lar log file ===
GeoApaChannelGroupService::ctor: Group 92 (apa092) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 93 (apa093) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 94 (apa094) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 95 (apa095) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 96 (apa096) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 97 (apa097) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 98 (apa098) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 99 (apa099) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 100 (apa100) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 101 (apa101) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 102 (apa102) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 103 (apa103) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 104 (apa104) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 105 (apa105) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 106 (apa106) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 107 (apa107) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 108 (apa108) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 109 (apa109) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 110 (apa110) has 864 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 111 (apa111) has 864 channels from 3/3 readout planes.
DuneToolManager::fclFilename: Taking fcl name from command line: lar -c reco2_pndr_matt_pandora.fcl -n 100 -o prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco_matt_2024-11-07T_212209Z.root root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/b5/15/prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root
AcdDigitReader::ctor:     LogLevel: 1
DuneToolManager::getPrivate: ERROR: Tool name is blank
StandardRawDigitExtractService::ctor: Retrieved digit read tool digitReader
StandardRawDigitExtractService::ctor: StandardRawDigitExtractService:
StandardRawDigitExtractService::ctor:         LogLevel: 1
StandardRawDigitExtractService::ctor:    DigitReadTool: digitReader
StandardRawDigitExtractService::ctor:   PedestalOption: 1
StandardRawDigitExtractService::ctor:     FlagStuckOff: 0
StandardRawDigitExtractService::ctor:      FlagStuckOn: 0
StandardRawDigitPrepService::ctor: Fetching extract service.
StandardRawDigitPrepService::ctor: Fetching channel status provider.
StandardRawDigitPrepService::ctor:   Channel status provider: @0xc358300
StandardRawDigitPrepService::ctor:   Extract service: @0x5574190
StandardRawDigitPrepService::ctor: Fetching deconvolution service.
StandardRawDigitPrepService::ctor:   Deconvolution service: @0x5c03660
StandardRawDigitPrepService::ctor: Fetching ROI building service.
StandardRawDigitPrepService::ctor:   ROI building service: @0xc353630
StandardRawDigitPrepService::ctor: Fetching wire building service.
StandardRawDigitPrepService::ctor:   Wire building service: @0x5bca710
StandardRawDigitPrepService::ctor: StandardRawDigitPrepService:
StandardRawDigitPrepService::ctor:              LogLevel: 1
StandardRawDigitPrepService::ctor:               SkipBad: 1
StandardRawDigitPrepService::ctor:             SkipNoisy: 0
StandardRawDigitPrepService::ctor:   ChannelStatusOnline: 0
StandardRawDigitPrepService::ctor:          DoMitigation: 0
StandardRawDigitPrepService::ctor:  DoEarlySignalFinding: 0
StandardRawDigitPrepService::ctor:        DoNoiseRemoval: 0
StandardRawDigitPrepService::ctor:       DoDeconvolution: 1
StandardRawDigitPrepService::ctor:  DoPedestalAdjustment: 0
StandardRawDigitPrepService::ctor:                 DoROI: 1
StandardRawDigitPrepService::ctor:               DoWires: 1
StandardRawDigitPrepService::ctor:                DoDump: 0
StandardRawDigitPrepService::ctor:  DoIntermediateStates: 0
StandardRawDigitPrepService::ctor: No display tools.
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
*************************************************************************************************************************************
Unique Ptrs that are added to the event
*************************************************************************************************************************************
* Data Product Name: InitialTrack             * Instance Name:  * Type: std::vector<recob::Track, std::allocator<recob::Track> >*   *
* Data Product Name: ShowerPCA                * Instance Name:  * Type: std::vector<recob::PCAxis, std::allocator<recob::PCAxis> >* *
* Data Product Name: shower                   * Instance Name:  * Type: std::vector<recob::Shower, std::allocator<recob::Shower> >* *
* Association Name:  PFParticlePCAxisAssn     * Instance Name:  * Type: art::Assns<recob::PFParticle, recob::PCAxis, void>*         *
* Association Name:  ShowerPCAxisAssn         * Instance Name:  * Type: art::Assns<recob::Shower, recob::PCAxis, void>*             *
* Association Name:  ShowerTrackAssn          * Instance Name:  * Type: art::Assns<recob::Shower, recob::Track, void>*              *
* Association Name:  ShowerTrackHitAssn       * Instance Name:  * Type: art::Assns<recob::Track, recob::Hit, void>*                 *
* Association Name:  clusterAssociationsbase  * Instance Name:  * Type: art::Assns<recob::Shower, recob::Cluster, void>*            *
* Association Name:  hitAssociationsbase      * Instance Name:  * Type: art::Assns<recob::Shower, recob::Hit, void>*                *
* Association Name:  pfShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::PFParticle, void>*         *
* Association Name:  spShowerAssociationsbase * Instance Name:  * Type: art::Assns<recob::Shower, recob::SpacePoint, void>*         *
*************************************************************************************************************************************
07-Nov-2024 21:22:37 UTC  Initiating request to open input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/b5/15/prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root"
07-Nov-2024 21:22:38 UTC  Opened input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/b5/15/prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root"
Pandora::ReadSettings - Invalid xml file.
Failure in reading pandora settings, STATUS_CODE_FAILURE
PandoraApi::ReadSettings(*m_pPrimaryPandora, fullConfigFileName) throw STATUS_CODE_FAILURE
    in function: ConfigurePandoraInstances
    in file:     /scratch/workspace/build-larsoft/BUILDTYPE/prof/QUAL/s131-e26/label1/swarm/label2/AlmaLinux-9.4/build/larpandora/v09_22_10-buildFW/src/larpandora/LArPandoraInterface/StandardPandora_module.cc line#: 120
07-Nov-2024 21:22:38 UTC  Closed input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/fardet-vd/b5/15/prodmarley_nue_cc_flat_dunevd10kt_1x8x14_3view_30deg_20241023T130403Z_gen_000209_supernova_g4stage1_g4stage2_detsim_reco.root"

====================================================================================================================
TimeTracker printout (sec)            Min           Avg           Max         Median          RMS         nEvts   
====================================================================================================================
[ No processed events ]
====================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 19859 MB
  Peak resident set size usage (VmHWM): 1126.65 MB
====================================================================================================
%MSG-s ArtException:  PostEndJob 07-Nov-2024 21:22:38 UTC ModuleEndJob
---- Unknown BEGIN
  An unknown exception was thrown while processing module StandardPandora/pandora during beginJob
---- Unknown END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
lar exit code 0
justIN time: 2024-11-23 04:31:48 UTC       justIN version: 01.01.09