Jobsub ID 244878.0@justin-prod-sched01.dune.hep.ac.uk
| Jobsub ID | 244878.0@justin-prod-sched01.dune.hep.ac.uk |
| Workflow ID | 2869 |
| Stage ID | 1 |
| User name | amoor@fnal.gov |
| HTCondor Group | group_dune |
| Requested | Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 80000 (22 hours) |
| Submitted time | 2024-08-19 13:34:43 |
| Site | US_FNAL-FermiGrid |
| Entry | FNAL_GPGrid_ce03_mcore_op_duneonly |
| Last heartbeat | 2024-08-19 16:56:22 |
| From worker node | Hostname | dunegli-3933839-0-fnpc8019.fnal.gov |
| cpuinfo | Intel(R) Xeon(R) CPU E5-2670 v3 @ 2.30GHz |
| OS release | Scientific Linux release 7.9 (Nitrogen) |
| Processors | 1 |
| RSS bytes | 4194304000 (4000 MiB) |
| Wall seconds limit | 172800 (48 hours) |
| Inner Apptainer? | True |
| Job state | jobscript_error |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk |
| Started | 2024-08-19 13:36:23 |
| Input files | usertests:000431_reco_data_2024-08-16T_162313Z.root
|
| Jobscript | Exit code | 1 |
| Real time | 0m (0s) |
| CPU time | 0m (0s = 0%) |
| Outputting started | |
| Output files | |
| Finished | 2024-08-19 16:56:22 |
| Saved logs | justin-logs:244878.0-justin-prod-sched01.dune.hep.ac.uk.logs.tgz |
| List job events Wrapper job log |
Jobscript log (last 10,000 characters)
AFM g4 jobscript.
Input PFN = root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/bb/8a/000431_reco_data_2024-08-16T_162313Z.root
Setting up larsoft UPS area... /cvmfs/larsoft.opensciencegrid.org
Setting up DUNE UPS area... /cvmfs/dune.opensciencegrid.org/products/dune/
/cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_4_3b/Linux64bit+3.10-2.17-e20-p3913-prof/lib/libXrdPosixPreload.so
../justin-jobscript: line 72: 1281 Aborted (core dumped) lar -c $FCL_FILE $events_option -o $outFile "$pfn" > ${fname}_reco_${now}.log 2>&1
=== Start last 100 lines of lar log file ===
%MSG
%MSG-i ParticleListActionService: larg4Main:largeant@BeginModule 19-Aug-2024 14:03:54 UTC run: 20000031 subRun: 0 event: 414
Not Stored Process summary:
compt : 2498213
annihil : 121950
Pair : 76
phot : 815479
Brem : 748589
conv : 121872
Ion : 324609
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 14:03:54 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:701
MCTruth Handles Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 14:03:54 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:708
mclistHandle Size: 1
%MSG
%MSG-i endOfEventAction: larg4Main:largeant@BeginModule 19-Aug-2024 14:03:54 UTC run: 20000031 subRun: 0 event: 414 ParticleListAction.cc:711
Found 1 particles
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 19-Aug-2024 14:03:54 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 848089
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneUInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneVInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCPlaneZInner
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActiveOuter
%MSG-i NuRandomService: SimDriftElectrons:elecDrift@BeginModule 19-Aug-2024 14:04:03 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'elecDrift': 246648247
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 19-Aug-2024 14:05:27 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'PDFastSim.photon': 338914067
%MSG
%MSG-i NuRandomService: PDFastSimPAR:PDFastSim@BeginModule 19-Aug-2024 14:05:27 UTC run: 20000031 subRun: 0 event: 414
Random seed for this event, engine 'PDFastSim.scinttime': 450103317
%MSG
Plugin version SecClnt v5.4.3 is incompatible with secztn v5.6.8 (must be <= 5.4.x) in sec.protocol libXrdSecztn-5.so
IonAndScint endJob.
19-Aug-2024 16:56:03 UTC Closed input file "root://fndca1.fnal.gov:1094/pnfs/fnal.gov/usr/dune/persistent/staging/usertests/bb/8a/000431_reco_data_2024-08-16T_162313Z.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 0.00767268 28.4818 10396.2 0.315147 510.278 414
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 7.9858e-05 0.000203723 0.00323644 0.000131501 0.000251791 414
simulate:rns:RandomNumberSaver 1.962e-05 2.9016e-05 0.000249587 2.5246e-05 1.3742e-05 414
simulate:largeant:larg4Main 0.00675728 0.87083 143.447 0.29088 7.09305 414
simulate:IonAndScint:IonAndScint 8.0372e-05 0.0230525 8.57689 0.000124968 0.420989 414
simulate:elecDrift:SimDriftElectrons 5.0462e-05 0.226216 83.7598 6.08255e-05 4.11132 414
simulate:PDFastSim:PDFastSimPAR 7.217e-05 27.3589 10160.4 9.58375e-05 498.727 414
simulate:muonfilter:LArG4ParticleFilter 1.4775e-05 8.25987e-05 0.00657823 2.20305e-05 0.000426005 414
[art]:TriggerResults:TriggerResultInserter 1.1419e-05 1.56262e-05 5.2963e-05 1.4522e-05 3.71094e-06 414
end_path:out1:RootOutput 7.312e-06 1.1301e-05 0.00022246 1.0031e-05 1.06841e-05 414
end_path:out1:RootOutput(write) 4.904e-06 0.00183565 0.487432 5.777e-06 0.0262226 413
================================================================================================================================
%MSG-i NuRandomService: RootOutput:out1@EndJob 19-Aug-2024 16:56:03 UTC ModuleEndJob
Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
algorithm version: EventTimestamp_v1
Configured value Last value ModuleLabel.InstanceName
(per event) 848089 IonAndScint.ISCalcAlg
(per event) 338914067 PDFastSim.photon
(per event) 450103317 PDFastSim.scinttime
(per event) 246648247 elecDrift
(per event) 831144890 largeant
%MSG
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 18486.1 MB
Peak resident set size usage (VmHWM): 15034.2 MB
====================================================================================================
TrigReport ---------- Event summary -------------
TrigReport Events total = 414 passed = 5 failed = 409
TrigReport ---------- Modules in End-path ----------
TrigReport Run Success Error Name
TrigReport 5 5 0 out1
TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 11790.164142 Real = 11887.468721
MemReport ---------- Memory summary [base-10 MB] ------
MemReport VmPeak = 18486.1 VmHWM = 15034.2
terminate called after throwing an instance of 'cet::coded_exception<art::errors::ErrorCodes, &art::ExceptionDetail::translate[abi:cxx11]>'
what(): ---- FatalRootError BEGIN
Fatal Root Error: TBufferFile::Expand
Requested size (2147483647) is too large (max is 2147483646).
ROOT severity: 6000
---- FatalRootError END
=== End last 100 lines of lar log file ===
lar exit code 0
Traceback (most recent call last):
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 434, in <module>
main()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 373, in main
mddict = expSpecificMetadata.getmetadata()
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 344, in getmetadata
jobt = self.get_job(proc)
File "/cvmfs/dune.opensciencegrid.org/products/dune/duneutil/v09_75_03d00/bin/extractor_prod.py", line 69, in get_job
raise RuntimeError('sam_metadata_dumper returned nonzero exit status {}.'.format(rc))
RuntimeError: sam_metadata_dumper returned nonzero exit status 1.
extractor_prod.py exit code 1
Error reading metadata from file: Expecting value: line 1 column 1 (char 0)
pdjson2metadata exit code 1
.:
total 109220
-rw-r--r-- 1 dunegli fnalgrid 110292815 Aug 19 16:56 RootOutput-0bab-83d0-73dc-6fa5.root
-rw-r--r-- 1 dunegli fnalgrid 1528774 Aug 19 16:56 000431_reco_data_2024-08-16T_162313Z_reco_2024-08-19T_133628Z.log
-rw-r--r-- 1 dunegli fnalgrid 7772 Aug 19 16:56 jobscript.log
-rw-r--r-- 1 dunegli fnalgrid 274 Aug 19 13:36 TFileService-1a06-df6c-6013-2009.root
-rw-r--r-- 1 dunegli fnalgrid 104 Aug 19 13:36 all-input-dids.txt
-rw-r--r-- 1 dunegli fnalgrid 0 Aug 19 16:56 000431_reco_data_2024-08-16T_162313Z_reco_data_2024-08-19T_133628Z.root.ext.json
-rw-r--r-- 1 dunegli fnalgrid 0 Aug 19 16:56 000431_reco_data_2024-08-16T_162313Z_reco_data_2024-08-19T_133628Z.root.json 