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Jobsub ID 226521.120@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID226521.120@justin-prod-sched02.dune.hep.ac.uk
Workflow ID7808
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-06-20 15:05:09
SiteFR_CCIN2P3
EntryDUNE_FR_CCIN2P3_cccondorce02
Last heartbeat2025-06-20 19:44:52
From worker nodeHostnameccwcondor0666
cpuinfoAMD EPYC 7302 16-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit106200 (29 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-06-20 19:10:06
Input fileshd-protodune:np04hd_raw_run027087_0033_dataflow0_datawriter_0_20240614T150308.hdf5
JobscriptExit code90
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-06-20 19:44:52
Saved logsjustin-logs:226521.120-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

ces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=5859 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
20-Jun-2025 21:34:35 CEST  Closed output file "pdhd_processing_1_226521_120_1750446617_stage1.root"

===================================================================================================================================
TimeTracker printout (sec)                           Min           Avg           Max         Median          RMS         nEvts   
===================================================================================================================================
Full event                                         30.5437       35.103        38.8651       34.9802       2.05818        40     
-----------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                       2.7692e-05    5.94019e-05   0.000174591   5.47935e-05   3.14875e-05      40     
produce:tpcrawdecoder:PDHDTPCReader                10.7133       14.5752       18.6525       14.3408       1.67843        40     
produce:triggerrawdecoder:PDHDTriggerReader3      0.037333      0.0381358     0.0447942     0.0378089    0.00137188       40     
produce:timingrawdecoder:PDHDTimingRawDecoder     0.018605      0.0196419     0.0330301     0.0189211    0.00307915       40     
produce:pdhddaphne:DAPHNEReaderPDHD              0.000294597   0.000456024   0.00106256    0.000437016   0.000114164      40     
produce:fembfilter:PDHDFEMBFilter                7.1866e-05    0.000118545   0.000540583   9.9078e-05    7.74589e-05      40     
produce:wclsdatahdfilter:WireCellToolkit           12.0615       15.2382       16.6538       15.5442       1.09941        40     
[art]:TriggerResults:TriggerResultInserter       1.6301e-05    3.90341e-05   0.000173518    3.448e-05    2.44437e-05      40     
end_path:out1:RootOutput                          3.357e-06    5.53977e-06   3.5958e-05     4.754e-06    4.97802e-06      40     
end_path:out1:RootOutput(write)                    4.0455        5.22971       6.17536       5.50696      0.637862        40     
===================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3110.65 MB
  Peak resident set size usage (VmHWM): 1574.08 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'pdhd_processing_1_226521_120_1750446617_stage1.root'}
stage2
Running stage2
['lar', '-c', 'fixed_keepup.fcl', 'pdhd_processing_1_226521_120_1750446617_stage1.root', '-n', '-1', '--nskip', '0', '-o', 'pdhd_processing_1_226521_120_1750446617_stage1_stage2.root', '-T', 'pdhd_processing_1_226521_120_1750446617_stage1_stage2_tfile.root']
ld_preload /cvmfs/larsoft.opensciencegrid.org/products/xrootd/v5_5_5a/Linux64bit+3.10-2.17-e26-p3915-prof/lib/libXrdPosixPreload.so
Stdout:
Art has completed and will exit with status 90.

Stderr:
Failed to parse the configuration file 'fixed_keepup.fcl' with exception
---- search_path BEGIN
  Can't find file "fixed_keepup.fcl"
---- search_path END


Error in processing stage2
Failed to parse the configuration file 'fixed_keepup.fcl' with exception
---- search_path BEGIN
  Can't find file "fixed_keepup.fcl"
---- search_path END


Error running. Exiting with 90
justIN time: 2025-08-15 07:08:26 UTC       justIN version: 01.03.02