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21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.

Jobsub ID 225743.41@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID225743.41@justin-prod-sched02.dune.hep.ac.uk
Workflow ID7776
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes2097152000 (2000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-06-19 16:09:51
SiteES_CIEMAT
EntryDUNE_T2_ES_CIEMAT_condorce1
Last heartbeat2025-06-19 19:55:20
From worker nodeHostnamegaew0217.ciemat.es
cpuinfoIntel(R) Xeon(R) Gold 5218 CPU @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes2097152000 (2000 MiB)
Wall seconds limit232200 (64 hours)
GPU
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-06-19 16:11:44
Input filesmonte-carlo-007776-000085
JobscriptExit code0
Real time3h (13362s)
CPU time3h (13189s = 98%)
Max RSS bytes23156195328 (22083 MiB)
Outputting started2025-06-19 19:54:26
Output fileshttps://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_2_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_1_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_9_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_6_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_3_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_5_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_4_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_8_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_7_41_225743_20250619T161146Z_225743_41_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_10_41_225743_20250619T161146Z_225743_41_1.h5
Finished2025-06-19 19:55:20
Saved logsjustin-logs:225743.41-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

---------------------------------------------------------
source:RootInput(read)                           0.000404684   0.00351262    0.00492387     0.0039275    0.00145208       10     
simulate:tpcrawdecoderbadapa1:WireCellToolkit      418.588       564.084       838.225       550.579       121.088        10     
[art]:TriggerResults:TriggerResultInserter       4.9516e-05    6.54324e-05   0.000113257   6.0261e-05    1.81595e-05      10     
end_path:out1:RootOutput                         1.2187e-05    1.94353e-05   4.3954e-05    1.7373e-05    8.52171e-06      10     
end_path:out1:RootOutput(write)                    2.77626       3.71165       5.25011       3.43598      0.760052        10     
===================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 26827.1 MB
  Peak resident set size usage (VmHWM): 23003.6 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5.root'}
stage6
Running stage6
['lar', '-c', 'run_nf_bad_apa1.fcl', 'placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5.root', '-n', '-1', '-e', '225743:41:1', '-o', 'placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5_stage6.root']
ld_preload /usr/libexec/coreutils/libstdbuf.so
Stdout:
Begin processing the 1st record. run: 225743 subRun: 41 event: 1 at 19-Jun-2025 21:50:13 CEST
Begin processing the 2nd record. run: 225743 subRun: 41 event: 2 at 19-Jun-2025 21:50:48 CEST
Begin processing the 3rd record. run: 225743 subRun: 41 event: 3 at 19-Jun-2025 21:51:12 CEST
Begin processing the 4th record. run: 225743 subRun: 41 event: 4 at 19-Jun-2025 21:51:35 CEST
Begin processing the 5th record. run: 225743 subRun: 41 event: 5 at 19-Jun-2025 21:51:57 CEST
Begin processing the 6th record. run: 225743 subRun: 41 event: 6 at 19-Jun-2025 21:52:17 CEST
Begin processing the 7th record. run: 225743 subRun: 41 event: 7 at 19-Jun-2025 21:52:38 CEST
Begin processing the 8th record. run: 225743 subRun: 41 event: 8 at 19-Jun-2025 21:52:58 CEST
Begin processing the 9th record. run: 225743 subRun: 41 event: 9 at 19-Jun-2025 21:53:19 CEST
Begin processing the 10th record. run: 225743 subRun: 41 event: 10 at 19-Jun-2025 21:53:40 CEST
Art has completed and will exit with status 0.

Stderr:
The following paths have not been enabled for execution and will be ignored:
  analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:nfsaver"
wclsFrameSaver: promising to produce raw::RawDigits named "raw"
wclsFrameSaver: promising to produce channel masks named "bad"
19-Jun-2025 21:50:12 CEST  Initiating request to open input file "placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5.root"
19-Jun-2025 21:50:13 CEST  Opened input file "placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
19-Jun-2025 21:50:30 CEST  Opened output file with pattern "placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
19-Jun-2025 21:54:01 CEST  Closed output file "placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5_stage6.root"
19-Jun-2025 21:54:01 CEST  Closed input file "placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      14.7683       16.0816       18.4626       15.9166       1.07361        10     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000188289   0.000403313   0.00109854    0.000365836   0.000242331      10     
simulate:wclsnfbadapa1:WireCellToolkit          12.4054       13.356        15.5473       12.8922      0.983389        10     
[art]:TriggerResults:TriggerResultInserter    1.4496e-05    2.15672e-05   7.0686e-05    1.63715e-05   1.63963e-05      10     
end_path:out1:RootOutput                       2.904e-06    5.0703e-06    2.0539e-05    3.1645e-06    5.18703e-06      10     
end_path:out1:RootOutput(write)                 2.36231       2.72484       3.90422       2.49866      0.481054        10     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 5385.06 MB
  Peak resident set size usage (VmHWM): 3723.87 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5_stage6.root', 'start_time': 1750362571.5266023, 'end_time': 1750362843.1696353}
TClass::Init:0: RuntimeWarning: no dictionary for class sim::IDE is available
Successfully opened file placeholder_1_225743_41_1750349512_stage1_stage2_stage3_stage4_stage5_stage6.root
<cppyy.gbl.art.InputTag object at 0xa69a490>
1 41 225743
2 41 225743
3 41 225743
4 41 225743
5 41 225743
6 41 225743
7 41 225743
8 41 225743
9 41 225743
10 41 225743
extracted_raw_10_41_225743.h5
extracted_raw_1_41_225743.h5
extracted_raw_2_41_225743.h5
extracted_raw_3_41_225743.h5
extracted_raw_4_41_225743.h5
extracted_raw_5_41_225743.h5
extracted_raw_6_41_225743.h5
extracted_raw_7_41_225743.h5
extracted_raw_8_41_225743.h5
extracted_raw_9_41_225743.h5
justIN time: 2025-08-14 17:54:10 UTC       justIN version: 01.03.02