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21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.

Jobsub ID 225743.18@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID225743.18@justin-prod-sched02.dune.hep.ac.uk
Workflow ID7776
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes2097152000 (2000 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-06-19 16:09:51
SiteES_CIEMAT
EntryDUNE_T2_ES_CIEMAT_condorce1
Last heartbeat2025-06-19 19:13:38
From worker nodeHostnamegaew0216.ciemat.es
cpuinfoIntel(R) Xeon(R) Gold 5218 CPU @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes2097152000 (2000 MiB)
Wall seconds limit232200 (64 hours)
GPU
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-06-19 16:11:40
Input filesmonte-carlo-007776-000077
JobscriptExit code0
Real time3h (10864s)
CPU time2h (10726s = 98%)
Max RSS bytes19883282432 (18962 MiB)
Outputting started2025-06-19 19:12:44
Output fileshttps://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_8_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_6_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_10_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_1_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_5_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_4_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_9_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_3_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_2_18_225743_20250619T161141Z_225743_18_1.h5
https://fndcadoor.fnal.gov:2880/dune/scratch/users/calcuttj/extracted_raw/07776/1/001/extracted_raw_7_18_225743_20250619T161141Z_225743_18_1.h5
Finished2025-06-19 19:13:38
Saved logsjustin-logs:225743.18-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

----------------------------------------------------------
source:RootInput(read)                           0.000871765   0.00371909    0.00575174    0.00356615    0.00135018       10     
simulate:tpcrawdecoderbadapa1:WireCellToolkit      373.29        471.079       649.058       447.464       81.3835        10     
[art]:TriggerResults:TriggerResultInserter       5.2679e-05    6.83821e-05   0.000114373   6.41245e-05   1.69236e-05      10     
end_path:out1:RootOutput                         1.2628e-05    1.71677e-05   3.8375e-05    1.4651e-05    7.24431e-06      10     
end_path:out1:RootOutput(write)                    2.66317       3.34837       5.91061       2.89136      0.993117        10     
===================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 23955.8 MB
  Peak resident set size usage (VmHWM): 19816.7 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5.root'}
stage6
Running stage6
['lar', '-c', 'run_nf_bad_apa1.fcl', 'placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5.root', '-n', '-1', '-e', '225743:18:1', '-o', 'placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5_stage6.root']
ld_preload /usr/libexec/coreutils/libstdbuf.so
Stdout:
Begin processing the 1st record. run: 225743 subRun: 18 event: 1 at 19-Jun-2025 21:08:41 CEST
Begin processing the 2nd record. run: 225743 subRun: 18 event: 2 at 19-Jun-2025 21:09:16 CEST
Begin processing the 3rd record. run: 225743 subRun: 18 event: 3 at 19-Jun-2025 21:09:37 CEST
Begin processing the 4th record. run: 225743 subRun: 18 event: 4 at 19-Jun-2025 21:09:57 CEST
Begin processing the 5th record. run: 225743 subRun: 18 event: 5 at 19-Jun-2025 21:10:18 CEST
Begin processing the 6th record. run: 225743 subRun: 18 event: 6 at 19-Jun-2025 21:10:37 CEST
Begin processing the 7th record. run: 225743 subRun: 18 event: 7 at 19-Jun-2025 21:10:56 CEST
Begin processing the 8th record. run: 225743 subRun: 18 event: 8 at 19-Jun-2025 21:11:17 CEST
Begin processing the 9th record. run: 225743 subRun: 18 event: 9 at 19-Jun-2025 21:11:37 CEST
Begin processing the 10th record. run: 225743 subRun: 18 event: 10 at 19-Jun-2025 21:11:58 CEST
Art has completed and will exit with status 0.

Stderr:
The following paths have not been enabled for execution and will be ignored:
  analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:nfsaver"
wclsFrameSaver: promising to produce raw::RawDigits named "raw"
wclsFrameSaver: promising to produce channel masks named "bad"
19-Jun-2025 21:08:41 CEST  Initiating request to open input file "placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5.root"
19-Jun-2025 21:08:41 CEST  Opened input file "placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
19-Jun-2025 21:09:02 CEST  Opened output file with pattern "placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: raw with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "raw"
wclsFrameSaver: found empty channel masks for "bad"
19-Jun-2025 21:12:18 CEST  Closed output file "placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5_stage6.root"
19-Jun-2025 21:12:18 CEST  Closed input file "placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                       14.78        15.5392       16.8946       15.4875      0.620556        10     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000202484   0.000375073   0.000841279   0.000333218   0.000168711      10     
simulate:wclsnfbadapa1:WireCellToolkit          12.3939       12.9828       14.3086       12.7483      0.622052        10     
[art]:TriggerResults:TriggerResultInserter    1.4772e-05    2.33526e-05    6.819e-05    1.76335e-05   1.54165e-05      10     
end_path:out1:RootOutput                       2.863e-06     5.946e-06    1.9225e-05    4.0145e-06    4.67533e-06      10     
end_path:out1:RootOutput(write)                 2.34815       2.55568       3.02262       2.43224      0.231528        10     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4979.5 MB
  Peak resident set size usage (VmHWM): 3323.92 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5_stage6.root', 'start_time': 1750360081.6037195, 'end_time': 1750360339.5644255}
TClass::Init:0: RuntimeWarning: no dictionary for class sim::IDE is available
Successfully opened file placeholder_1_225743_18_1750349505_stage1_stage2_stage3_stage4_stage5_stage6.root
<cppyy.gbl.art.InputTag object at 0x926d500>
1 18 225743
2 18 225743
3 18 225743
4 18 225743
5 18 225743
6 18 225743
7 18 225743
8 18 225743
9 18 225743
10 18 225743
extracted_raw_10_18_225743.h5
extracted_raw_1_18_225743.h5
extracted_raw_2_18_225743.h5
extracted_raw_3_18_225743.h5
extracted_raw_4_18_225743.h5
extracted_raw_5_18_225743.h5
extracted_raw_6_18_225743.h5
extracted_raw_7_18_225743.h5
extracted_raw_8_18_225743.h5
extracted_raw_9_18_225743.h5
justIN time: 2025-08-14 16:38:03 UTC       justIN version: 01.03.02