21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.
Jobsub ID 224182.0@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 224182.0@justin-prod-sched02.dune.hep.ac.uk | |
| Workflow ID | 7666 | |
| Stage ID | 1 | |
| User name | calcuttj@fnal.gov | |
| HTCondor Group | group_dune | |
| Requested | Processors | 1 |
| GPU | No | |
| RSS bytes | 2097152000 (2000 MiB) | |
| Wall seconds limit | 80000 (22 hours) | |
| Submitted time | 2025-06-18 09:20:51 | |
| Site | UK_QMUL | |
| Entry | DUNE_UK_London_QMUL_arcce03 | |
| Last heartbeat | 2025-06-18 10:08:28 | |
| From worker node | Hostname | cn101.htc.esc.qmul |
| cpuinfo | Intel(R) Xeon(R) Gold 6248R CPU @ 3.00GHz | |
| OS release | Scientific Linux release 7.9 (Nitrogen) | |
| Processors | 1 | |
| RSS bytes | 2097152000 (2000 MiB) | |
| Wall seconds limit | 171000 (47 hours) | |
| GPU | ||
| Inner Apptainer? | True | |
| Job state | jobscript_error | |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk | |
| Started | 2025-06-18 09:22:35 | |
| Input files | monte-carlo-007666-000057 | |
| Jobscript | Exit code | 247 |
| Real time | 0m (0s) | |
| CPU time | 0m (0s = 0%) | |
| Max RSS bytes | 0 (0 MiB) | |
| Outputting started | ||
| Output files | ||
| Finished | 2025-06-18 10:08:28 | |
| Saved logs | justin-logs:224182.0-justin-prod-sched02.dune.hep.ac.uk.logs.tgz | |
| List job events Wrapper job log | ||
Jobscript log (last 10,000 characters)
lding cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
18-Jun-2025 10:31:14 BST Initiating request to open input file "placeholder_1_224182_0_1750238569_stage1.root"
18-Jun-2025 10:31:15 BST Opened input file "placeholder_1_224182_0_1750238569_stage1.root"
18-Jun-2025 10:31:21 BST Opened output file with pattern "placeholder_1_224182_0_1750238569_stage1_stage2.root"
18-Jun-2025 10:36:13 BST Closed output file "placeholder_1_224182_0_1750238569_stage1_stage2.root"
18-Jun-2025 10:36:13 BST Closed input file "placeholder_1_224182_0_1750238569_stage1.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 8.46438 10.9755 15.1619 10.3893 2.1813 10
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000276721 0.000378161 0.000915358 0.000340024 0.000181659 10
simulate:IonAndScint:IonAndScint 1.6611 2.07105 2.91481 1.90715 0.398159 10
simulate:IonAndScintExternal:IonAndScint 0.00207593 0.00360894 0.00599686 0.00326032 0.00120544 10
[art]:TriggerResults:TriggerResultInserter 1.2715e-05 1.97114e-05 7.7765e-05 1.3236e-05 1.93564e-05 10
end_path:out1:RootOutput 2.87e-06 4.8945e-06 2.0397e-05 3.1095e-06 5.17518e-06 10
end_path:out1:RootOutput(write) 6.79915 8.89998 12.2426 8.27992 1.89063 10
================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 4598.07 MB
Peak resident set size usage (VmHWM): 3609.44 MB
Details saved in: 'mem.db'
====================================================================================================
{'art_out': 'placeholder_1_224182_0_1750238569_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_224182_0_1750238569_stage1_stage2.root', '-n', '-1', '-e', '224182:0:1', '-o', 'placeholder_1_224182_0_1750238569_stage1_stage2_stage3.root']
ld_preload /usr/libexec/coreutils/libstdbuf.so
Stdout:
Begin processing the 1st record. run: 224182 subRun: 0 event: 1 at 18-Jun-2025 10:37:32 BST
Larwirecell::SimDepoSource got 866738 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 224182 subRun: 0 event: 2 at 18-Jun-2025 10:49:37 BST
Larwirecell::SimDepoSource got 889997 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 224182 subRun: 0 event: 3 at 18-Jun-2025 10:57:54 BST
Larwirecell::SimDepoSource got 862233 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Stderr:
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
18-Jun-2025 10:37:31 BST Initiating request to open input file "placeholder_1_224182_0_1750238569_stage1_stage2.root"
18-Jun-2025 10:37:32 BST Opened input file "placeholder_1_224182_0_1750238569_stage1_stage2.root"
SimDepoSource got 866738 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 866738 depos spanning: [-3313.04, 2966.35]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
18-Jun-2025 10:45:36 BST Opened output file with pattern "placeholder_1_224182_0_1750238569_stage1_stage2_stage3.root"
SimDepoSource got 889997 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 889997 depos spanning: [-3280.82, 3107.69]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 862233 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 862233 depos spanning: [-3314.34, 2956.27]us
Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
IonAndScint
IonAndScintExternal
cosmicgenerator
largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
18-Jun-2025 10:37:31 BST Initiating request to open input file "placeholder_1_224182_0_1750238569_stage1_stage2.root"
18-Jun-2025 10:37:32 BST Opened input file "placeholder_1_224182_0_1750238569_stage1_stage2.root"
SimDepoSource got 866738 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 866738 depos spanning: [-3313.04, 2966.35]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
18-Jun-2025 10:45:36 BST Opened output file with pattern "placeholder_1_224182_0_1750238569_stage1_stage2_stage3.root"
SimDepoSource got 889997 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 889997 depos spanning: [-3280.82, 3107.69]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 862233 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 862233 depos spanning: [-3314.34, 2956.27]us
Error running. Exiting with 247