justIN           Dashboard       Workflows       Jobs       AWT       Sites       Storages       Docs       Login

Jobsub ID 207575.185@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID207575.185@justin-prod-sched02.dune.hep.ac.uk
Workflow ID7106
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-05-22 03:02:48
SiteUS_FNAL-FermiGrid
EntryFNAL_GPGrid_ce04_mcore_op_duneonly
Last heartbeat2025-05-22 05:44:18
From worker nodeHostnamedunegli-5363590-0-fnpc22015.fnal.gov
cpuinfoAMD EPYC 7543 32-Core Processor
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit172800 (48 hours)
GPU
Inner Apptainer?True
Job statejobscript_error
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-22 05:19:43
Input filesmonte-carlo-007106-001613
JobscriptExit code247
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-05-22 05:44:18
Saved logsjustin-logs:207575.185-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

o any path,
or they have been assigned to ignored path(s):
  cosmicgenerator
  largeant
  tpcrawdecoderperfect
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
22-May-2025 05:24:59 UTC  Initiating request to open input file "placeholder_1_207575_185_1747891195_stage1.root"
22-May-2025 05:24:59 UTC  Opened input file "placeholder_1_207575_185_1747891195_stage1.root"
22-May-2025 05:25:07 UTC  Opened output file with pattern "placeholder_1_207575_185_1747891195_stage1_stage2.root"
22-May-2025 05:26:09 UTC  Closed output file "placeholder_1_207575_185_1747891195_stage1_stage2.root"
22-May-2025 05:26:09 UTC  Closed input file "placeholder_1_207575_185_1747891195_stage1.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      7.34046       8.80648       9.94066       8.85437      0.901739         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000272525   0.000448216   0.00089874    0.000309215   0.000235517       5     
simulate:IonAndScint:IonAndScint                1.56066       1.84223       2.02082       1.91585      0.177209         5     
simulate:IonAndScintExternal:IonAndScint      0.00188354    0.00213802    0.00245668    0.00195903    0.000258548       5     
[art]:TriggerResults:TriggerResultInserter    1.6791e-05    3.17178e-05   8.8157e-05    1.8114e-05    2.8225e-05        5     
end_path:out1:RootOutput                       4.188e-06     9.077e-06    2.5638e-05     5.15e-06     8.29021e-06       5     
end_path:out1:RootOutput(write)                 5.77703       6.96084       7.91488       6.93542      0.730199         5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4998.62 MB
  Peak resident set size usage (VmHWM): 3975.51 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_207575_185_1747891195_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_207575_185_1747891195_stage1_stage2.root', '-n', '-1', '-e', '207575:185:1', '-o', 'placeholder_1_207575_185_1747891195_stage1_stage2_stage3.root']
Stdout:
Begin processing the 1st record. run: 207575 subRun: 185 event: 1 at 22-May-2025 05:26:54 UTC
Larwirecell::SimDepoSource got 1136833 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 207575 subRun: 185 event: 2 at 22-May-2025 05:35:45 UTC
Larwirecell::SimDepoSource got 1076604 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'

Stderr:
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
22-May-2025 05:26:53 UTC  Initiating request to open input file "placeholder_1_207575_185_1747891195_stage1_stage2.root"
22-May-2025 05:26:54 UTC  Opened input file "placeholder_1_207575_185_1747891195_stage1_stage2.root"
SimDepoSource got 1136833 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1136833 depos spanning: [-3268.73, 3035.64]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
22-May-2025 05:35:31 UTC  Opened output file with pattern "placeholder_1_207575_185_1747891195_stage1_stage2_stage3.root"
SimDepoSource got 1076604 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1076604 depos spanning: [-3322.81, 2950.36]us

Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
22-May-2025 05:26:53 UTC  Initiating request to open input file "placeholder_1_207575_185_1747891195_stage1_stage2.root"
22-May-2025 05:26:54 UTC  Opened input file "placeholder_1_207575_185_1747891195_stage1_stage2.root"
SimDepoSource got 1136833 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1136833 depos spanning: [-3268.73, 3035.64]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
22-May-2025 05:35:31 UTC  Opened output file with pattern "placeholder_1_207575_185_1747891195_stage1_stage2_stage3.root"
SimDepoSource got 1076604 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1076604 depos spanning: [-3322.81, 2950.36]us

Error running. Exiting with 247
justIN time: 2025-05-22 15:39:52 UTC       justIN version: 01.03.01