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Jobsub ID 204352.3@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID204352.3@justin-prod-sched02.dune.hep.ac.uk
Workflow ID6960
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-05-15 04:59:58
SiteUS_FNAL-FermiGrid
EntryFNAL_GPGrid_ce03_mcore_op_duneonly
Last heartbeat2025-05-15 07:17:36
From worker nodeHostnamedunegli-5016925-0-fnpc17131.fnal.gov
cpuinfoIntel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit172800 (48 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-15 06:28:19
Input filesmonte-carlo-006960-004409
JobscriptExit code247
Real time0m (0s)
CPU time0m (0s = 0%)
Max RSS bytes0 (0 MiB)
Outputting started 
Output files
Finished2025-05-15 07:17:36
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

=======================================================================================
Full event                                      8.4642        9.45741       9.87897       9.70464       0.52256         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000149306   0.000217979   0.000408834   0.000167548   9.77991e-05       5     
simulate:IonAndScint:IonAndScint                1.5852        1.7633        1.95039       1.71865      0.129052         5     
simulate:IonAndScintExternal:IonAndScint      0.00163028    0.00293885    0.00514204    0.00267756    0.00128128        5     
[art]:TriggerResults:TriggerResultInserter    1.0089e-05    1.79558e-05   4.4695e-05    1.0706e-05    1.34262e-05       5     
end_path:out1:RootOutput                       2.487e-06     4.981e-06     1.332e-05     3.053e-06    4.1758e-06        5     
end_path:out1:RootOutput(write)                 6.87689       7.69051       8.12628       7.83694      0.430646         5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 5296.27 MB
  Peak resident set size usage (VmHWM): 4288.54 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204352_3_1747290508_stage1_stage2.root'}
stage3
Running stage3
['lar', '-c', 'run_wirecell_perfect_apa1.fcl', 'placeholder_1_204352_3_1747290508_stage1_stage2.root', '-n', '-1', '-o', 'placeholder_1_204352_3_1747290508_stage1_stage2_stage3.root']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 06:33:58 UTC
Larwirecell::SimDepoSource got 1216121 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 06:44:01 UTC
Larwirecell::SimDepoSource got 1218216 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 06:55:01 UTC
Larwirecell::SimDepoSource got 1277599 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 07:06:39 UTC
Larwirecell::SimDepoSource got 1154199 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 07:16:52 UTC
Larwirecell::SimDepoSource got 1264190 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'

Stderr:
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 06:33:57 UTC  Initiating request to open input file "placeholder_1_204352_3_1747290508_stage1_stage2.root"
15-May-2025 06:33:58 UTC  Opened input file "placeholder_1_204352_3_1747290508_stage1_stage2.root"
SimDepoSource got 1216121 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1216121 depos spanning: [-3236.68, 3113.98]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 06:43:44 UTC  Opened output file with pattern "placeholder_1_204352_3_1747290508_stage1_stage2_stage3.root"
SimDepoSource got 1218216 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1218216 depos spanning: [-3284.17, 3058.81]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1277599 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1277599 depos spanning: [-3269.12, 3113.59]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1154199 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1154199 depos spanning: [-3317.4, 3049.77]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1264190 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1264190 depos spanning: [-3252.73, 2971.61]us

Error in processing stage3
The following paths have not been enabled for execution and will be ignored:
  analyze
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  IonAndScint
  IonAndScintExternal
  cosmicgenerator
  largeant
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 06:33:57 UTC  Initiating request to open input file "placeholder_1_204352_3_1747290508_stage1_stage2.root"
15-May-2025 06:33:58 UTC  Opened input file "placeholder_1_204352_3_1747290508_stage1_stage2.root"
SimDepoSource got 1216121 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1216121 depos spanning: [-3236.68, 3113.98]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 06:43:44 UTC  Opened output file with pattern "placeholder_1_204352_3_1747290508_stage1_stage2_stage3.root"
SimDepoSource got 1218216 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1218216 depos spanning: [-3284.17, 3058.81]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1277599 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1277599 depos spanning: [-3269.12, 3113.59]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1154199 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1154199 depos spanning: [-3317.4, 3049.77]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 1264190 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 1264190 depos spanning: [-3252.73, 2971.61]us

Error running. Exiting with 247
justIN time: 2025-06-04 15:52:59 UTC       justIN version: 01.03.01