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Jobsub ID 204351.164@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID204351.164@justin-prod-sched02.dune.hep.ac.uk
Workflow ID6960
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-05-15 04:47:01
SiteUK_Brunel
EntryCMSHTPC_T2_UK_London_Brunel_dc2_22
Last heartbeat2025-05-15 08:34:17
From worker nodeHostnamewn-b8-26-01.brunel.ac.uk
cpuinfoIntel(R) Xeon(R) CPU E5-2630 v3 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-15 06:26:33
Input filesmonte-carlo-006960-003089
JobscriptExit code0
Real time2h (7642s)
CPU time1h (6531s = 85%)
Max RSS bytes10181005312 (9709 MiB)
Outputting started2025-05-15 08:33:56
Output files
Finished2025-05-15 08:34:17
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

ring to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
15-May-2025 09:26:22 BST  Initiating request to open input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5.root"
15-May-2025 09:26:22 BST  Opened input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 96762 traces, 96762 summary
Retagger: tagging trace set: gauss with 78822 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 78822 traces tagged "gauss"
FrameSaver: q=2.27217e+06 n=1151311 tag=gauss
wclsFrameSaver: saving 96762 traces tagged "wiener"
FrameSaver: q=2.56953e+06 n=1053368 tag=wiener
15-May-2025 09:27:20 BST  Opened output file with pattern "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 92912 traces, 92912 summary
Retagger: tagging trace set: gauss with 76635 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 76635 traces tagged "gauss"
FrameSaver: q=2.16961e+06 n=1133425 tag=gauss
wclsFrameSaver: saving 92912 traces tagged "wiener"
FrameSaver: q=2.44333e+06 n=1045735 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 84200 traces, 84200 summary
Retagger: tagging trace set: gauss with 71771 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 71771 traces tagged "gauss"
FrameSaver: q=1.9966e+06 n=1085237 tag=gauss
wclsFrameSaver: saving 84200 traces tagged "wiener"
FrameSaver: q=2.17738e+06 n=994953 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 97064 traces, 97064 summary
Retagger: tagging trace set: gauss with 77739 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 77739 traces tagged "gauss"
FrameSaver: q=2.26452e+06 n=1147840 tag=gauss
wclsFrameSaver: saving 97064 traces tagged "wiener"
FrameSaver: q=2.55804e+06 n=1056034 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 75032 traces, 75032 summary
Retagger: tagging trace set: gauss with 61966 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 61966 traces tagged "gauss"
FrameSaver: q=1.44017e+06 n=830534 tag=gauss
wclsFrameSaver: saving 75032 traces tagged "wiener"
FrameSaver: q=1.61855e+06 n=755608 tag=wiener
15-May-2025 09:32:24 BST  Closed output file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 09:32:24 BST  Closed input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      52.8075       56.5077       62.4607       54.298        3.74921         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000473936   0.000948186   0.00118658    0.000982229   0.000258968       5     
simulate:wclsnfspbadapa1:WireCellToolkit        52.4563       56.1124       62.0512       53.8448       3.77301         5     
[art]:TriggerResults:TriggerResultInserter    3.3701e-05    5.07212e-05    7.209e-05    5.0436e-05    1.26571e-05       5     
end_path:out1:RootOutput                       6.829e-06    1.05508e-05   1.9667e-05     7.532e-06    4.86364e-06       5     
end_path:out1:RootOutput(write)                0.279897      0.391577      0.475136      0.405681      0.0706624        5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4789.93 MB
  Peak resident set size usage (VmHWM): 3141.69 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root'}
extract
Running extract
['lar', '-c', 'run_extract_wire.fcl', 'placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root', '-n', '-1']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 09:33:02 BST
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 09:33:09 BST
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 09:33:17 BST
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 09:33:22 BST
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 09:33:31 BST
Art has completed and will exit with status 0.

Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
15-May-2025 09:33:01 BST  Initiating request to open input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 09:33:01 BST  Opened input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root"
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
15-May-2025 09:33:39 BST  Closed input file "placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6.root"

======================================================================================================================
TimeTracker printout (sec)              Min           Avg           Max         Median          RMS         nEvts   
======================================================================================================================
Full event                            1.84968       3.03314       4.08097       2.83272      0.765408         5     
----------------------------------------------------------------------------------------------------------------------
source:RootInput(read)              0.000431921   0.000832744   0.00137405    0.000819392   0.000353405       5     
end_path:extractwire:ExtractWire      1.84864        3.032        4.0797        2.83114      0.765328         5     
======================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3016.18 MB
  Peak resident set size usage (VmHWM): 2161.06 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204351_164_1747290400_stage1_stage2_stage3_stage4_stage5_stage6_extract.root', 'start_time': 1747297947.3615174, 'end_time': 1747298022.9486394}
extracted_wires_r00001_s00000.h5
justIN time: 2025-08-14 16:37:33 UTC       justIN version: 01.03.02