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Jobsub ID 204351.135@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID204351.135@justin-prod-sched02.dune.hep.ac.uk
Workflow ID6960
Stage ID1
User namecalcuttj@fnal.gov
HTCondor Groupgroup_dune
RequestedProcessors1
GPUNo
RSS bytes8387559424 (7999 MiB)
Wall seconds limit80000 (22 hours)
Submitted time2025-05-15 04:47:01
SiteUK_Brunel
EntryCMSHTPC_T2_UK_London_Brunel_dc2_22
Last heartbeat2025-05-15 09:29:27
From worker nodeHostnamewn-b7-04-00.brunel.ac.uk
cpuinfoIntel(R) Xeon(R) CPU E5645 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes8387559424 (7999 MiB)
Wall seconds limit171000 (47 hours)
GPU
Inner Apptainer?True
Job stateoutputting_failed
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-05-15 06:26:23
Input filesmonte-carlo-006960-003059
JobscriptExit code0
Real time3h (10963s)
CPU time2h (10600s = 96%)
Max RSS bytes11885318144 (11334 MiB)
Outputting started2025-05-15 09:29:07
Output files
Finished2025-05-15 09:29:27
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

ering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
15-May-2025 10:19:12 BST  Initiating request to open input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5.root"
15-May-2025 10:19:13 BST  Opened input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 85619 traces, 85619 summary
Retagger: tagging trace set: gauss with 72023 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 72023 traces tagged "gauss"
FrameSaver: q=1.81337e+06 n=1042115 tag=gauss
wclsFrameSaver: saving 85619 traces tagged "wiener"
FrameSaver: q=2.04139e+06 n=962890 tag=wiener
15-May-2025 10:20:40 BST  Opened output file with pattern "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 86864 traces, 86864 summary
Retagger: tagging trace set: gauss with 72531 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 72531 traces tagged "gauss"
FrameSaver: q=1.79248e+06 n=1031991 tag=gauss
wclsFrameSaver: saving 86864 traces tagged "wiener"
FrameSaver: q=2.04602e+06 n=953150 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 107609 traces, 107609 summary
Retagger: tagging trace set: gauss with 87932 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 87932 traces tagged "gauss"
FrameSaver: q=2.55553e+06 n=1348560 tag=gauss
wclsFrameSaver: saving 107609 traces tagged "wiener"
FrameSaver: q=2.84714e+06 n=1225269 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 85712 traces, 85712 summary
Retagger: tagging trace set: gauss with 70996 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 70996 traces tagged "gauss"
FrameSaver: q=1.85801e+06 n=998506 tag=gauss
wclsFrameSaver: saving 85712 traces tagged "wiener"
FrameSaver: q=2.09244e+06 n=921228 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 90822 traces, 90822 summary
Retagger: tagging trace set: gauss with 73815 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 73815 traces tagged "gauss"
FrameSaver: q=1.89216e+06 n=1051241 tag=gauss
wclsFrameSaver: saving 90822 traces tagged "wiener"
FrameSaver: q=2.13703e+06 n=959175 tag=wiener
15-May-2025 10:27:07 BST  Closed output file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 10:27:07 BST  Closed input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      80.0292       84.5306       90.2301       82.0686       4.41466         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.000925775   0.00121352    0.00145258    0.00124931    0.000216237       5     
simulate:wclsnfspbadapa1:WireCellToolkit        79.4508       84.0032       89.7835       81.6218       4.47629         5     
[art]:TriggerResults:TriggerResultInserter    4.3191e-05    7.20178e-05   0.000173377    4.773e-05    5.07715e-05       5     
end_path:out1:RootOutput                       9.297e-06    1.74648e-05   4.9176e-05     9.573e-06    1.58565e-05       5     
end_path:out1:RootOutput(write)                0.442516       0.52209      0.680305      0.471296      0.0926162        5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4990 MB
  Peak resident set size usage (VmHWM): 3334.69 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root'}
extract
Running extract
['lar', '-c', 'run_extract_wire.fcl', 'placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root', '-n', '-1']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 10:28:05 BST
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 10:28:16 BST
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 10:28:28 BST
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 10:28:41 BST
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 10:28:54 BST
Art has completed and will exit with status 0.

Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
15-May-2025 10:28:04 BST  Initiating request to open input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 10:28:05 BST  Opened input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root"
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
15-May-2025 10:29:05 BST  Closed input file "placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6.root"

======================================================================================================================
TimeTracker printout (sec)              Min           Avg           Max         Median          RMS         nEvts   
======================================================================================================================
Full event                            3.61531       5.89959       7.79888       5.30619       1.55998         5     
----------------------------------------------------------------------------------------------------------------------
source:RootInput(read)              0.000864884   0.00109892    0.00148631    0.000970053   0.000223683       5     
end_path:extractwire:ExtractWire      3.61351       5.89805       7.79735       5.30502       1.56012         5     
======================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3201.09 MB
  Peak resident set size usage (VmHWM): 2344.65 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204351_135_1747290397_stage1_stage2_stage3_stage4_stage5_stage6_extract.root', 'start_time': 1747301229.0479524, 'end_time': 1747301346.5559456}
extracted_wires_r00001_s00000.h5
justIN time: 2025-08-14 18:22:32 UTC       justIN version: 01.03.02