Jobsub ID 204346.101@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID	204346.101@justin-prod-sched02.dune.hep.ac.uk
Workflow ID	6960
Stage ID	1
User name	calcuttj@fnal.gov
HTCondor Group	group_dune
Requested	Processors	1
	GPU	No
	RSS bytes	8387559424 (7999 MiB)
	Wall seconds limit	80000 (22 hours)
Submitted time	2025-05-15 04:37:17
Site	UK_Durham
Entry	DUNE_UK_SGridDurham_ce3
Last heartbeat	2025-05-15 07:47:02
From worker node	Hostname	n219.dur.scotgrid.ac.uk
	cpuinfo	Intel(R) Xeon(R) Gold 5220 CPU @ 2.20GHz
	OS release	Scientific Linux release 7.9 (Nitrogen)
	Processors	1
	RSS bytes	8387559424 (7999 MiB)
	Wall seconds limit	171000 (47 hours)
	GPU
	Inner Apptainer?	True
Job state	outputting_failed
Allocator name	justin-allocator-pro.dune.hep.ac.uk
Started	2025-05-15 06:16:58
Input files	monte-carlo-006960-003722
Jobscript	Exit code	0
	Real time	1h (5384s)
	CPU time	1h (5346s = 99%)
	Max RSS bytes	11963052032 (11408 MiB)
Outputting started	2025-05-15 07:46:43
Output files
Finished	2025-05-15 07:46:58
List job events Wrapper job log
Jobscript log (last 10,000 characters)

to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsRawFrameSource"
Outputer: "wclsFrameSaver:spsaver"
wclsFrameSaver: promising to produce recob::Wires named "gauss"
wclsFrameSaver: promising to produce recob::Wires named "wiener"
15-May-2025 08:40:44 BST  Initiating request to open input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5.root"
15-May-2025 08:40:44 BST  Opened input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 101587 traces, 101587 summary
Retagger: tagging trace set: gauss with 82479 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 82479 traces tagged "gauss"
FrameSaver: q=2.37495e+06 n=1257600 tag=gauss
wclsFrameSaver: saving 101587 traces tagged "wiener"
FrameSaver: q=2.62831e+06 n=1137193 tag=wiener
15-May-2025 08:41:42 BST  Opened output file with pattern "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root"
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 107553 traces, 107553 summary
Retagger: tagging trace set: gauss with 87726 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 87726 traces tagged "gauss"
FrameSaver: q=2.5241e+06 n=1327582 tag=gauss
wclsFrameSaver: saving 107553 traces tagged "wiener"
FrameSaver: q=2.83427e+06 n=1221400 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 92135 traces, 92135 summary
Retagger: tagging trace set: gauss with 75390 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 75390 traces tagged "gauss"
FrameSaver: q=2.01123e+06 n=1118175 tag=gauss
wclsFrameSaver: saving 92135 traces tagged "wiener"
FrameSaver: q=2.28174e+06 n=1033992 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 87850 traces, 87850 summary
Retagger: tagging trace set: gauss with 74715 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 74715 traces tagged "gauss"
FrameSaver: q=2.00109e+06 n=1102326 tag=gauss
wclsFrameSaver: saving 87850 traces tagged "wiener"
FrameSaver: q=2.21153e+06 n=1022183 tag=wiener
RawFrameSource: got 10240 raw::RawDigit objects
	input nticks=6000 keeping as is
Retagger: tagging trace set: wiener with 83086 traces, 83086 summary
Retagger: tagging trace set: gauss with 69543 traces, 0 summary
wclsFrameSaver saving cooked to 6000 ticks
wclsFrameSaver: saving 69543 traces tagged "gauss"
FrameSaver: q=1.66977e+06 n=962537 tag=gauss
wclsFrameSaver: saving 83086 traces tagged "wiener"
FrameSaver: q=1.9051e+06 n=885783 tag=wiener
15-May-2025 08:45:40 BST  Closed output file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 08:45:40 BST  Closed input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      52.6442       54.112        54.8681       54.2543      0.817199         5     
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read)                        0.00057191    0.000828643   0.00108095    0.000856331   0.000173579       5     
simulate:wclsnfspbadapa1:WireCellToolkit        52.3179       53.7282       54.499        53.816       0.801383         5     
[art]:TriggerResults:TriggerResultInserter    2.6905e-05    3.93502e-05   7.2613e-05    3.2767e-05    1.68556e-05       5     
end_path:out1:RootOutput                       9.479e-06    1.22968e-05   1.9441e-05     1.089e-05    3.61884e-06       5     
end_path:out1:RootOutput(write)                0.323267      0.379952      0.434472      0.368385      0.0383136        5     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 4803.52 MB
  Peak resident set size usage (VmHWM): 3195.23 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root'}
extract
Running extract
['lar', '-c', 'run_extract_wire.fcl', 'placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root', '-n', '-1']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 08:46:06 BST
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 08:46:13 BST
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 08:46:21 BST
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 08:46:28 BST
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 08:46:34 BST
Art has completed and will exit with status 0.

Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to  primaryGeneratorActionsMap_
registering to   eventActionsMap_
registering to   trackingActionsMap_
registering to  steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
15-May-2025 08:46:06 BST  Initiating request to open input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root"
15-May-2025 08:46:06 BST  Opened input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root"
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
initializeNtuple() called with cflag_=6
15-May-2025 08:46:42 BST  Closed input file "placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6.root"

======================================================================================================================
TimeTracker printout (sec)              Min           Avg           Max         Median          RMS         nEvts   
======================================================================================================================
Full event                            2.26007       2.8512        3.46377       2.97058      0.439565         5     
----------------------------------------------------------------------------------------------------------------------
source:RootInput(read)              0.000600849   0.00131597    0.00267018    0.00113082    0.000721346       5     
end_path:extractwire:ExtractWire      2.25699       2.84914       3.46223       2.96769      0.439877         5     
======================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 3021.5 MB
  Peak resident set size usage (VmHWM): 2165.15 MB
  Details saved in: 'mem.db'
====================================================================================================

{'art_out': 'placeholder_1_204346_101_1747289824_stage1_stage2_stage3_stage4_stage5_stage6_extract.root', 'start_time': 1747295141.4283075, 'end_time': 1747295203.546637}
extracted_wires_r00001_s00000.h5