21 July 2025: This instance at RAL is read-only. Please do not try submitting new workflows for now.
Jobsub ID 204212.28@justin-prod-sched02.dune.hep.ac.uk
| Jobsub ID | 204212.28@justin-prod-sched02.dune.hep.ac.uk | |
| Workflow ID | 6960 | |
| Stage ID | 1 | |
| User name | calcuttj@fnal.gov | |
| HTCondor Group | group_dune | |
| Requested | Processors | 1 |
| GPU | No | |
| RSS bytes | 8387559424 (7999 MiB) | |
| Wall seconds limit | 80000 (22 hours) | |
| Submitted time | 2025-05-14 23:30:18 | |
| Site | US_FNAL-FermiGrid | |
| Entry | FNAL_GPGrid_ce03_mcore_op_duneonly | |
| Last heartbeat | 2025-05-15 02:23:51 | |
| From worker node | Hostname | dunegli-5013365-0-fnpc23006.fnal.gov |
| cpuinfo | AMD EPYC 7543 32-Core Processor | |
| OS release | Scientific Linux release 7.9 (Nitrogen) | |
| Processors | 1 | |
| RSS bytes | 8387559424 (7999 MiB) | |
| Wall seconds limit | 172800 (48 hours) | |
| GPU | ||
| Inner Apptainer? | True | |
| Job state | jobscript_error | |
| Allocator name | justin-allocator-pro.dune.hep.ac.uk | |
| Started | 2025-05-15 01:26:32 | |
| Input files | monte-carlo-006960-003436 | |
| Jobscript | Exit code | 247 |
| Real time | 0m (0s) | |
| CPU time | 0m (0s = 0%) | |
| Max RSS bytes | 0 (0 MiB) | |
| Outputting started | ||
| Output files | ||
| Finished | 2025-05-15 02:23:51 | |
| Saved logs | justin-logs:204212.28-justin-prod-sched02.dune.hep.ac.uk.logs.tgz | |
| List job events Wrapper job log | ||
Jobscript log (last 10,000 characters)
ed input file "placeholder_1_204212_28_1747272398_stage1_stage2_stage3.root"
================================================================================================================================
TimeTracker printout (sec) Min Avg Max Median RMS nEvts
================================================================================================================================
Full event 27.7894 28.3809 29.1839 28.1035 0.546444 5
--------------------------------------------------------------------------------------------------------------------------------
source:RootInput(read) 0.000368575 0.00129221 0.00233937 0.00144569 0.000728498 5
simulate:wclsnfspperfect:WireCellToolkit 27.5918 28.1908 28.9653 27.9269 0.53887 5
[art]:TriggerResults:TriggerResultInserter 3.2322e-05 4.52566e-05 8.888e-05 3.4335e-05 2.18647e-05 5
end_path:out1:RootOutput 4.619e-06 9.9672e-06 2.3174e-05 7.204e-06 6.69033e-06 5
end_path:out1:RootOutput(write) 0.172306 0.186715 0.214484 0.176432 0.0160791 5
================================================================================================================================
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 4747.01 MB
Peak resident set size usage (VmHWM): 3140.14 MB
Details saved in: 'mem.db'
====================================================================================================
{'art_out': 'placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root'}
stage5
Running stage5
['lar', '-c', 'run_wirecell_bad_apa1.fcl', 'placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root', '-n', '-1', '-o', 'placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4_stage5.root']
Stdout:
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 15-May-2025 02:00:04 UTC
Larwirecell::SimDepoSource got 852362 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 2nd record. run: 1 subRun: 0 event: 2 at 15-May-2025 02:04:57 UTC
Larwirecell::SimDepoSource got 937564 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 3rd record. run: 1 subRun: 0 event: 3 at 15-May-2025 02:10:16 UTC
Larwirecell::SimDepoSource got 896525 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 4th record. run: 1 subRun: 0 event: 4 at 15-May-2025 02:15:27 UTC
Larwirecell::SimDepoSource got 976320 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Begin processing the 5th record. run: 1 subRun: 0 event: 5 at 15-May-2025 02:21:39 UTC
Larwirecell::SimDepoSource got 903915 associated depos from InputTag: label = 'IonAndScint', instance = 'priorSCE'
Stderr:
The following paths have not been enabled for execution and will be ignored:
analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 02:00:03 UTC Initiating request to open input file "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root"
15-May-2025 02:00:04 UTC Opened input file "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root"
SimDepoSource got 852362 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 852362 depos spanning: [-3310.86, 3038.13]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 02:04:49 UTC Opened output file with pattern "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4_stage5.root"
SimDepoSource got 937564 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 937564 depos spanning: [-3209.32, 2959.64]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 896525 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 896525 depos spanning: [-3145.33, 3045.81]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 976320 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 976320 depos spanning: [-3309.87, 3119.76]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 903915 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 903915 depos spanning: [-3312.32, 2986.1]us
Error in processing stage5
The following paths have not been enabled for execution and will be ignored:
analyze
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_01_03d00/gdml/protodunehd_v6_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 1148
Info in <TGeoManager::CloseGeometry>: 25608 nodes/ 5535 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
registering to primaryGeneratorActionsMap_
registering to eventActionsMap_
registering to trackingActionsMap_
registering to steppingActionsMap_
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Inputer: "wclsSimDepoSource:"
Outputer: "wclsSimChannelSink:postdrift"
Outputer: "wclsFrameSaver:simdigits"
wclsFrameSaver: promising to produce raw::RawDigits named "daq"
15-May-2025 02:00:03 UTC Initiating request to open input file "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root"
15-May-2025 02:00:04 UTC Opened input file "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4.root"
SimDepoSource got 852362 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 852362 depos spanning: [-3310.86, 3038.13]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
15-May-2025 02:04:49 UTC Opened output file with pattern "placeholder_1_204212_28_1747272398_stage1_stage2_stage3_stage4_stage5.root"
SimDepoSource got 937564 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 937564 depos spanning: [-3209.32, 2959.64]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 896525 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 896525 depos spanning: [-3145.33, 3045.81]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 976320 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 976320 depos spanning: [-3309.87, 3119.76]us
Retagger: tagging trace set: daq with 10240 traces, 0 summary
wclsFrameSaver: saving raw::RawDigits tagged "daq"
SimDepoSource got 903915 depos from art tag "InputTag: label = 'IonAndScint', instance = ''" returns: okay
SimDepoSource: ready with 903915 depos spanning: [-3312.32, 2986.1]us
Error running. Exiting with 247