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Jobsub ID 168669.1@justin-prod-sched02.dune.hep.ac.uk

Jobsub ID168669.1@justin-prod-sched02.dune.hep.ac.uk
Workflow ID5874
Stage ID1
User nameykermaid@fnal.gov
HTCondor Groupgroup_dune.prod_mcsim
RequestedProcessors1
GPUNo
RSS bytes4193255424 (3999 MiB)
Wall seconds limit18000 (5 hours)
Submitted time2025-04-02 04:45:37
SiteUK_Liverpool
EntryDUNE_UK_Liverpool_hepgrid5
Last heartbeat2025-04-02 05:50:10
From worker nodeHostnamer21-n01.ph.liv.ac.uk
cpuinfoIntel(R) Xeon(R) CPU E5620 @ 2.40GHz
OS releaseScientific Linux release 7.9 (Nitrogen)
Processors1
RSS bytes4193255424 (3999 MiB)
Wall seconds limit259200 (72 hours)
GPU
Inner Apptainer?True
Job statefinished
Allocator namejustin-allocator-pro.dune.hep.ac.uk
Started2025-04-02 04:46:37
Input filesvd-protodune:np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008.hdf5
JobscriptExit code0
Real time1h (3678s)
CPU time5m (316s = 8%)
Max RSS bytes815325184 (777 MiB)
Outputting started2025-04-02 05:47:55
Output filesvd-protodune-det-reco:np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup.root
Finished2025-04-02 05:50:10
Saved logsjustin-logs:168669.1-justin-prod-sched02.dune.hep.ac.uk.logs.tgz
List job events     Wrapper job log

Jobscript log (last 10,000 characters)

rid.org/products/wirecell/v0_29_5/Linux64bit+3.10-2.17-e26-prof/lib
TRITON_INC=/cvmfs/larsoft.opensciencegrid.org/products/triton/v2_25_0d/Linux64bit+3.10-2.17-e26/include
LIBJPEG_TURBO_INC=/cvmfs/larsoft.opensciencegrid.org/products/libjpeg_turbo/v2_1_0/Linux64bit+3.10-2.17/include
LAREVENTDISPLAY_LIB=/cvmfs/larsoft.opensciencegrid.org/products/lareventdisplay/v10_00_06/slf7.x86_64.e26.prof/lib
PPFX_VERSION=v02_20_04
NUG4_VERSION=v1_16_06
SETUP_LARDATAALG=lardataalg v10_00_02 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
LARCOREALG_INC=/cvmfs/larsoft.opensciencegrid.org/products/larcorealg/v10_00_00/include
G4PARTICLEHPDATA=/cvmfs/larsoft.opensciencegrid.org/products/g4tendl/v1_3_2/G4TENDL1.3.2
SETUP_LARANA=larana v10_00_06 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_LARSOFT=larsoft v10_03_01 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_CETLIB=cetlib v3_18_02 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
SETUP_FHICLCPP=fhiclcpp v4_18_04 -f Linux64bit+3.10-2.17 -z /cvmfs/larsoft.opensciencegrid.org/products -q e26:prof
OPENBLAS_INC=/cvmfs/larsoft.opensciencegrid.org/products/openblas/v0_3_23/Linux64bit+3.10-2.17-e26/include
PYTHON_INCLUDE=/cvmfs/larsoft.opensciencegrid.org/products/python/v3_9_15/Linux64bit+3.10-2.17/include/python3.9
_=/usr/bin/env
Will use justin-get-file
pfn: root://eospublic.cern.ch:1094//eos/experiment/neutplatform/protodune/dune/vd-protodune/b3/a2/np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008.hdf5
did: vd-protodune:np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008.hdf5
Running reco stage1
The following paths have not been enabled for execution and will be ignored:
  read_tpc
The following module labels are either not assigned to any path,
or they have been assigned to ignored path(s):
  emtrkmichelid
  gaushit
  hitpdune
  nhitsfilter
  opflash
  ophit
  opslicer
  pandora
  pandoraGnocalo
  pandoraShower
  pandoraStdcalo
  pandoraTrack
  pandoraWriter
  pandoracalipid
  pandorapid
  pdhddaphne
  reco3d
  rns
  wclsdatavd
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/dune.opensciencegrid.org/products/dune/dunecore/v10_03_01d01/gdml/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Error: Unsupported GDML Tag Used :gdml_simple_extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :extension. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Error: Unsupported GDML Tag Used :color. Please Check Geometry/Schema.
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16451 nodes/ 2412 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
GeoApaChannelGroupService::ctor: Group 0 (apa0) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 1 (apa1) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 2 (apa2) has 3072 channels from 3/3 readout planes.
GeoApaChannelGroupService::ctor: Group 3 (apa3) has 3072 channels from 3/3 readout planes.
DAPHNE Channel Map: Building DAPHNE channel map from file DAPHNE_vd_coldbox_ChannelMap_bde2.txt
PDVD Channel Map: Building TPC wiremap from file PD2VDBottomTPCChannelMap_v1.txt
PDSP Channel Map: Building RCE TPC wiremap from file protoDUNETPCChannelMap_RCE_v4.txt
PDSP Channel Map: Building FELIX TPC wiremap from file protoDUNETPCChannelMap_RCE_v4.txt
PDSP Channel Map: Building SSP channel map from file protoDUNESSPChannelMap_v1.txt
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
db: runtime1743565808
02-Apr-2025 05:48:12 BST  Opened output file with pattern "%ifb_reco_stage1_%tc_keepup.root"
02-Apr-2025 06:47:43 BST  Closed output file "np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup.root"

================================================================================================================================
TimeTracker printout (sec)                        Min           Avg           Max         Median          RMS         nEvts   
================================================================================================================================
Full event                                      57.4679       82.1275       126.445       80.976        14.6228        44     
--------------------------------------------------------------------------------------------------------------------------------
source:HDF5RawInput3(read)                    1.3219e-05    1.90066e-05   0.000102375   1.5908e-05    1.31438e-05      44     
produce:tpcrawdecoder:PDVDTPCReader             54.4995       79.2454       123.458       78.052        14.6293        44     
[art]:TriggerResults:TriggerResultInserter    1.9505e-05    2.31092e-05   6.0436e-05    2.13305e-05   6.38023e-06      44     
end_path:out1:RootOutput                       4.194e-06    7.58741e-06   7.0708e-05     4.716e-06    1.01401e-05      44     
end_path:out1:RootOutput(write)                 2.77425       2.88154       3.1114        2.86022      0.0866052       44     
================================================================================================================================

====================================================================================================
MemoryTracker summary (base-10 MB units used)

  Peak virtual memory usage (VmPeak)  : 1649.81 MB
  Peak resident set size usage (VmHWM): 815.325 MB
  Details saved in: 'mem.db'
====================================================================================================
Art has completed and will exit with status 0.
Output files:
\tReco: np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup.root
\tHists: np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup_hists.root
Forming reco metadata
Successfully opened file np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup.root
Ran successfully
{
  "name": "np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup.root",
  "namespace": "vd-protodune-det-reco",
  "metadata": {
    "core.file_format": "artroot",
    "core.application.name": "reco",
    "core.application.family": "dunesw",
    "core.application.version": "v10_03_01d01",
    "core.data_tier": "full-reconstructed",
    "dune.config_file": "standard_reco_stage1_protodunevd_keepup.fcl",
    "dune.campaign": "vd-protodune-reco-keepup-v0",
    "core.start_time": 1743572864.0,
    "core.end_time": 1743572864.0,
    "core.events": [
      6425,
      6426,
      6427,
      6428,
      6429,
      6430,
      6431,
      6432,
      6433,
      6434,
      6435,
      6436,
      6437,
      6438,
      6439,
      6440,
      6441,
      6442,
      6443,
      6444,
      6445,
      6446,
      6447,
      6448,
      6449,
      6450,
      6451,
      6452,
      6453,
      6454,
      6455,
      6456,
      6457,
      6458,
      6459,
      6460,
      6461,
      6462,
      6463,
      6464,
      6465,
      6466,
      6467,
      6468
    ],
    "core.event_count": 44,
    "core.first_event_number": 6425,
    "core.last_event_number": 6468,
    "core.data_stream": "cosmics",
    "core.file_content_status": "good",
    "core.file_type": "detector",
    "core.run_type": "vd-protodune",
    "core.runs": [
      35707
    ],
    "core.runs_subruns": [
      3570700001
    ],
    "dune.daq_test": true,
    "retention.status": "active",
    "retention.class": "physics"
  },
  "parents": [
    {
      "did": "vd-protodune:np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008.hdf5"
    }
  ]
}Forming hist metadata
formed
{
  "name": "np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008_reco_stage1_20250402T054743_keepup_hists.root",
  "namespace": "vd-protodune-det-reco",
  "metadata": {
    "core.file_format": "root",
    "core.application.name": "reco",
    "core.application.family": "dunesw",
    "core.application.version": "v10_03_01d01",
    "core.data_tier": "root-tuple-virtual",
    "dune.config_file": "standard_reco_stage1_protodunevd_keepup.fcl",
    "dune.campaign": "vd-protodune-reco-keepup-v0",
    "core.start_time": 1743572864.0,
    "core.end_time": 1743572864.0,
    "core.data_stream": "cosmics",
    "core.file_content_status": "good",
    "core.file_type": "detector",
    "core.run_type": "vd-protodune",
    "core.runs": [
      35707
    ],
    "core.runs_subruns": [
      3570700001
    ],
    "dune.daq_test": true,
    "retention.status": "active",
    "retention.class": "physics"
  },
  "parents": [
    {
      "did": "vd-protodune:np02vd_raw_run035707_0146_df-s04-d0_dw_0_20250402T035008.hdf5"
    }
  ]
}
justIN time: 2025-04-03 08:15:41 UTC       justIN version: 01.03.00