Jobsub ID 166655.54@justin-prod-sched02.dune.hep.ac.uk
Jobsub ID | 166655.54@justin-prod-sched02.dune.hep.ac.uk |
Workflow ID | 5746 |
Stage ID | 1 |
User name | ykermaid@fnal.gov |
HTCondor Group | group_dune |
Requested | Processors | 1 |
GPU | No |
RSS bytes | 6815744000 (6500 MiB) |
Wall seconds limit | 80000 (22 hours) |
Submitted time | 2025-03-27 11:13:42 |
Site | UK_Glasgow |
Entry | CLAS12_T3_UK_ScotGrid_GLA_ce04_scitok |
Last heartbeat | 2025-03-27 11:53:52 |
From worker node | Hostname | wn-d20-023.beowulf.cluster |
cpuinfo | AMD EPYC 7452 32-Core Processor |
OS release | Scientific Linux release 7.9 (Nitrogen) |
Processors | 1 |
RSS bytes | 6815744000 (6500 MiB) |
Wall seconds limit | 171000 (47 hours) |
GPU | |
Inner Apptainer? | True |
Job state | outputting_failed |
Allocator name | justin-allocator-pro.dune.hep.ac.uk |
Started | 2025-03-27 11:36:00 |
Input files | monte-carlo-005746-000025
|
Jobscript | Exit code | 1 |
Real time | 0m (0s) |
CPU time | 0m (0s = 0%) |
Max RSS bytes | 0 (0 MiB) |
Outputting started | |
Output files | |
Finished | 2025-03-27 11:53:52 |
List job events Wrapper job log |
Jobscript log (last 10,000 characters)
ANDOM: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Instantiated HepJamesRandom engine "PDFastSim:0:photon" with seed 0.
%MSG
%MSG-i NuRandomService: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Seeding HepJamesRandom engine "PDFastSim:photon" with seed 0.
%MSG
%MSG-i RANDOM: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Instantiated HepJamesRandom engine "PDFastSim:0:scinttime" with seed 0.
%MSG
%MSG-i NuRandomService: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Seeding HepJamesRandom engine "PDFastSim:scinttime" with seed 0.
%MSG
ScintTimeLAr Tool configure:
Fast rising time: 0, Fast decay time: 6, Slow rising time: 0, Slow decay time: 1600
%MSG-i PDFastSimPVS: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Initializing PDFastSimPVS.
%MSG
%MSG-i PropagationTimeModel: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Initializing Photon propagation time model.
%MSG
%MSG-i PropagationTimeModel: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Using VUV timing parameterization
%MSG
%MSG-i PropagationTimeModel: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:36:51 GMT ModuleConstruction
Generating VUV parameters
%MSG
%MSG-i PropagationTimeModel: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:40:30 GMT ModuleConstruction
Photon propagation time model initalized.
%MSG
%MSG-i PDFastSimPVS: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:40:30 GMT ModuleConstruction
Use Lite Photon.
%MSG
%MSG-i PDFastSimPVS: PDFastSimPVS:PDFastSim@Construction 27-Mar-2025 11:40:30 GMT ModuleConstruction
PDFastSimPVS Initialization finish
%MSG
27-Mar-2025 11:40:30 GMT Initiating request to open input file "prod_muon_400MeV_protodunevd_1_166655_54_1743075371_gen_g4_stage1.root"
%MSG-i Root_Information: TriggerResultInserter:TriggerResults@Construction TClass::Init() 27-Mar-2025 11:40:31 GMT ModuleConstruction
no dictionary for class sim::IDE is available
ROOT severity: 2000
%MSG
27-Mar-2025 11:40:31 GMT Opened input file "prod_muon_400MeV_protodunevd_1_166655_54_1743075371_gen_g4_stage1.root"
IonAndScint beginJob.
Using Correlated algorithm to calculate IS.
%MSG-i ISCalcCorrelated: IonAndScint:IonAndScint@BeginJob 27-Mar-2025 11:40:31 GMT ModuleBeginJob ISCalcCorrelated.cxx:40
IonizationAndScintillation/ISCalcCorrelated Initialize.
%MSG
Begin processing the 1st record. run: 1 subRun: 0 event: 1 at 27-Mar-2025 11:40:31 GMT
%MSG-w PhotonBackTrackerService: ProcessEvent 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
Rebuild failed to get the OpDetBTRs. This is expected when running on a generation or simulation step.
%MSG
%MSG-i NuRandomService: IonAndScint:IonAndScint@BeginModule 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
Random seed for this event, engine 'IonAndScint.ISCalcAlg': 833306424
%MSG
IonAndScint Module Producer
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolCryostat
Skip SimEnergyDeposit in: LArG4DetectorServicevolBeamPlIINi
SimEnergyDeposit input module: largeant, instance name: LArG4DetectorServicevolTPCActive
%MSG-i NuRandomService: PDFastSimPVS:PDFastSim@BeginModule 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.photon': 663009289
%MSG
%MSG-i NuRandomService: PDFastSimPVS:PDFastSim@BeginModule 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
Random seed for this event, engine 'PDFastSim.scinttime': 364376612
%MSG
%MSG-i PhotonVisibilityService: PDFastSimPVS:PDFastSim@BeginModule 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
PhotonVisibilityService Loading photon library from file /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root for 15625 voxels and 40 optical detectors.
%MSG
%MSG-i PhotonLibrary: PDFastSimPVS:PDFastSim@BeginModule 27-Mar-2025 11:40:31 GMT run: 1 subRun: 0 event: 1
Reading photon library from input file: /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root
%MSG
27-Mar-2025 11:40:32 GMT Opened output file with pattern "prod_muon_400MeV_protodunevd_1_166655_54_1743075371_gen_g4_stage1_g4_stage2.root"
%MSG-i FastCloning: PDFastSimPVS:PDFastSim@BeginModule 27-Mar-2025 11:40:32 GMT run: 1 subRun: 0 event: 1
Fast cloning event data products from input file.
%MSG
IonAndScint endJob.
27-Mar-2025 11:40:32 GMT Closed input file "prod_muon_400MeV_protodunevd_1_166655_54_1743075371_gen_g4_stage1.root"
Malformed TimeTracker database. The TimeEvent table is empty, but
the TimeModule table is not. This can happen if an exception has
been thrown from a module while processing the first event. Any
saved database file is suspect and should not be used.
%MSG-i NuRandomService: RootOutput:out1@EndJob 27-Mar-2025 11:40:32 GMT ModuleEndJob
Summary of seeds computed by the NuRandomService
Random policy: 'perEvent'
algorithm version: EventTimestamp_v1
Configured value Last value ModuleLabel.InstanceName
(per event) 833306424 IonAndScint.ISCalcAlg
(per event) 663009289 PDFastSim.photon
(per event) 364376612 PDFastSim.scinttime
%MSG
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 1177.82 MB
Peak resident set size usage (VmHWM): 450.138 MB
====================================================================================================
TrigReport ---------- Event summary -------------
TrigReport Events total = 1 passed = 0 failed = 1
TrigReport ---------- Modules in End-path ----------
TrigReport Run Success Error Name
TrigReport 0 0 0 out1
TimeReport ---------- Time summary [sec] -------
TimeReport CPU = 0.114077 Real = 0.472479
MemReport ---------- Memory summary [base-10 MB] ------
MemReport VmPeak = 1177.82 VmHWM = 450.138
%MSG-s ArtException: PostEndJob 27-Mar-2025 11:40:32 GMT ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- OtherArt BEGIN
---- PhotonLibrary BEGIN
Error in ttree load, reading photon library: /cvmfs/dune.osgstorage.org/pnfs/fnal.gov/usr/dune/persistent/stash/PhotonPropagation/LibraryData/libext_protodunevd_v4_Ar_Baseline_v09_69_00d00_5e7_25x25x25_landau_20231216.root
The above exception was thrown while processing module PDFastSimPVS/PDFastSim run: 1 subRun: 0 event: 1
---- PhotonLibrary END
---- OtherArt END
Exception going through path simulate
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
Fatal Root Error: TTree::SetEntries
Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while sim::ParticleAncestryMap_largeant__G4Stage1. has 10 entries.
ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
Stderr:
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/8e14053062785f80c03da35c9e53597243e9b1b5/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16499 nodes/ 2408 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Error in processing g4_stage2
Info in <TGeoManager::Import>: Reading geometry from file: /cvmfs/fifeuser1.opensciencegrid.org/sw/dune/8e14053062785f80c03da35c9e53597243e9b1b5/protodunevd_v4_refactored.gdml
Info in <TGeoManager::TGeoManager>: Geometry GDMLImport, Geometry imported from GDML created
Info in <TGeoManager::SetTopVolume>: Top volume is volWorld. Master volume is volWorld
Info in <TGeoNavigator::BuildCache>: --- Maximum geometry depth set to 100
Info in <TGeoManager::CheckGeometry>: Fixing runtime shapes...
Info in <TGeoManager::CheckGeometry>: ...Nothing to fix
Info in <TGeoManager::CloseGeometry>: Counting nodes...
Info in <TGeoManager::Voxelize>: Voxelizing...
Info in <TGeoManager::CloseGeometry>: Building cache...
Info in <TGeoManager::CountLevels>: max level = 5, max placements = 292
Info in <TGeoManager::CloseGeometry>: 16499 nodes/ 2408 volume UID's in Geometry imported from GDML
Info in <TGeoManager::CloseGeometry>: ----------------modeler ready----------------
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_U (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_V (Potential memory leak).
Warning in <TFile::Append>: Replacing existing TH1: FieldResponse_Y (Potential memory leak).
Error running. Exiting with 1