Jobsub ID 108835.18@justin-prod-sched02.dune.hep.ac.uk
Jobscript log (last 10,000 characters)
ra::PandoraContentApiImpl::RunAlgorithm(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const + 0x14a (0x14895de6e2ca in /cvmfs/larsoft.opensciencegrid.org/products/pandora/v03_16_00l/Linux64bit+3.10-2.17-e26-prof/lib/libPandoraSDK.so.03.04)
frame #17: pandora::Pandora::ProcessEvent() + 0x5a (0x14895decce4a in /cvmfs/larsoft.opensciencegrid.org/products/pandora/v03_16_00l/Linux64bit+3.10-2.17-e26-prof/lib/libPandoraSDK.so.03.04)
frame #18: lar_pandora::StandardPandora::RunPandoraInstances() + 0x17 (0x148847e09a77 in /cvmfs/larsoft.opensciencegrid.org/products/larpandora/v09_22_09/slf7.x86_64.e26.prof/lib/liblarpandora_LArPandoraInterface_StandardPandora_module.so)
frame #19: lar_pandora::LArPandora::produce(art::Event&) + 0x54 (0x1489720923e4 in /cvmfs/larsoft.opensciencegrid.org/products/larpandora/v09_22_09/slf7.x86_64.e26.prof/lib/liblarpandora_LArPandoraInterface.so)
frame #20: art::EDProducer::produceWithFrame(art::Event&, art::ProcessingFrame const&) + 0x38 (0x14899ca69138 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Core.so)
frame #21: art::detail::Producer::doEvent(art::EventPrincipal&, art::ModuleContext const&, std::atomic<unsigned long>&, std::atomic<unsigned long>&, std::atomic<unsigned long>&) + 0x52 (0x14899cadc062 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Core.so)
frame #22: art::Worker::runWorker(art::EventPrincipal&, art::ModuleContext const&) + 0x215 (0x14899b240565 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Principal.so)
frame #23: <unknown function> + 0x407e3 (0x14899b2407e3 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Principal.so)
frame #24: tbb::detail::d1::function_task<hep::concurrency::SerialTaskQueue::QueuedTask>::execute(tbb::detail::d1::execution_data&) + 0x1f (0x1489a1a03adf in /cvmfs/larsoft.opensciencegrid.org/products/hep_concurrency/v1_09_02/slf7.x86_64.e26.prof/lib/libhep_concurrency.so)
frame #25: <unknown function> + 0x424f1 (0x1489a06424f1 in /cvmfs/larsoft.opensciencegrid.org/products/tbb/v2021_9_0/Linux64bit+3.10-2.17-e26/lib/libtbb_debug.so.12)
frame #26: <unknown function> + 0x41437 (0x1489a0641437 in /cvmfs/larsoft.opensciencegrid.org/products/tbb/v2021_9_0/Linux64bit+3.10-2.17-e26/lib/libtbb_debug.so.12)
frame #27: <unknown function> + 0x408ba (0x1489a06408ba in /cvmfs/larsoft.opensciencegrid.org/products/tbb/v2021_9_0/Linux64bit+3.10-2.17-e26/lib/libtbb_debug.so.12)
frame #28: tbb::detail::r1::execute_and_wait(tbb::detail::d1::task&, tbb::detail::d1::task_group_context&, tbb::detail::d1::wait_context&, tbb::detail::d1::task_group_context&) + 0x43 (0x1489a06406fe in /cvmfs/larsoft.opensciencegrid.org/products/tbb/v2021_9_0/Linux64bit+3.10-2.17-e26/lib/libtbb_debug.so.12)
frame #29: void art::EventProcessor::process<(art::Level)4>() + 0x2b7 (0x14899ce2b537 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #30: void art::EventProcessor::process<(art::Level)3>() + 0x75 (0x14899ce48845 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #31: void art::EventProcessor::process<(art::Level)2>() + 0x75 (0x14899ce48a15 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #32: void art::EventProcessor::process<(art::Level)1>() + 0x75 (0x14899ce48bb5 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #33: void art::EventProcessor::process<(art::Level)0>() + 0x85 (0x14899ce48d65 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #34: art::EventProcessor::runToCompletion() + 0x19 (0x14899ce325b9 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_EventProcessor.so)
frame #35: art::run_art(int, char**, boost::program_options::options_description&, std::vector<std::unique_ptr<art::OptionsHandler, std::default_delete<art::OptionsHandler> >, std::allocator<std::unique_ptr<art::OptionsHandler, std::default_delete<art::OptionsHandler> > > >&&) + 0x2762 (0x1489a268c252 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Art.so)
frame #36: artapp(int, char**, bool) + 0x732 (0x1489a26859f2 in /cvmfs/larsoft.opensciencegrid.org/products/art/v3_14_04/slf7.x86_64.e26.prof/lib/libart_Framework_Art.so)
frame #37: main + 0xe (0x40124e in lar)
frame #38: __libc_start_main + 0xf5 (0x14899da22555 in /lib64/libc.so.6)
frame #39: lar() [0x4012d0]
AdaBoostDecisionTree::Initialize - Invalid xml file.
AdaBoostDecisionTree::Initialize - Invalid xml file.
AdaBoostDecisionTree::Initialize - Invalid xml file.
AdaBoostDecisionTree::Initialize - Invalid xml file.
Failure in algorithm Alg0002, LArDLVertexing, unknown exception
PandoraContentApi::GetList(*this, m_inputVertexListName, pVertexList) throw STATUS_CODE_NOT_INITIALIZED
in function: GetHitRegion
in file: /exp/dune/app/users/ismerio/env-testreco/srcs/larpandoracontent/larpandoradlcontent/LArVertex/DlVertexingAlgorithm.cc line#: 624
Failure in algorithm Alg0003, LArDLVertexing, STATUS_CODE_NOT_INITIALIZED
> Running Algorithm: Alg0003, LArNeutrinoEventValidation
---RAW-MATCHING-OUTPUT--------------------------------------------------------------------------
Failure in algorithm Alg0003, LArNeutrinoEventValidation, STATUS_CODE_NOT_INITIALIZED
%MSG-e WireIDIntersectionCheck: PMAlgTrackMaker:pmtrack@BeginModule 23-Nov-2024 05:53:25 GMT run: 6210996 subRun: 1 event: 70201
Comparing two wires in the same plane: return failure
%MSG
%MSG-e WireIDIntersectionCheck: PMAlgTrackMaker:pmtracktc@BeginModule 23-Nov-2024 05:53:25 GMT run: 6210996 subRun: 1 event: 70201
Comparing two wires in the same plane: return failure
%MSG
%MSG-e WireIDIntersectionCheck: PMAlgTrajFitter:pmtrajfittc@BeginModule 23-Nov-2024 05:53:25 GMT run: 6210996 subRun: 1 event: 70201
Comparing two wires in the same plane: return failure
%MSG
%MSG-e WireIDIntersectionCheck: PMAlgTrajFitter:pmtrajfittc@BeginModule 23-Nov-2024 05:53:25 GMT run: 6210996 subRun: 1 event: 70201
Comparing two wires in the same plane: return failure
%MSG
Boundary wire vector sizes: 39, 44, 35
minwire 0: 1065
minwire 1: 1549
minwire 2: 1035
Used alternate method to get min and max wires due to vertex determination failure: 22, 221
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 199
Used alternate method to get min and max wires due to vertex determination failure: 39, 238
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 199
Used alternate method to get min and max wires due to vertex determination failure: 0, 199
Used alternate method to get min and max tdcs due to vertex determination failure: 0, 199
Could not find serving_default in model signatures.
[libprotobuf FATAL /cvmfs/larsoft.opensciencegrid.org/products/protobuf/v3_21_12a/Linux64bit+3.10-2.17-e26/include/google/protobuf/map.h:1300] CHECK failed: it != end(): key not found: serving_default
23-Nov-2024 05:53:54 GMT Opened output file with pattern "atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6210996_351_20231121T150122Z_gen_g4_detsim_hitreco__20240507T181420Z_reco2_reco_data_2024-11-23T_054658Z.root"
23-Nov-2024 05:55:39 GMT Closed input file "root://mover.pp.rl.ac.uk:1094/pnfs/pp.rl.ac.uk/data/dune/fardet-hd/38/a4/atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6210996_351_20231121T150122Z_gen_g4_detsim_hitreco__20240507T181420Z_reco2.root"
Malformed TimeTracker database. The TimeEvent table is empty, but
the TimeModule table is not. This can happen if an exception has
been thrown from a module while processing the first event. Any
saved database file is suspect and should not be used.
====================================================================================================
MemoryTracker summary (base-10 MB units used)
Peak virtual memory usage (VmPeak) : 5997.55 MB
Peak resident set size usage (VmHWM): 1165.61 MB
====================================================================================================
PandoraMonitoring, only able to use default TApplication (limited functionality).
PandoraMonitoring::SaveTree, error: No tree with name 'Validation' exists.
%MSG-s ArtException: PostEndJob 23-Nov-2024 05:55:40 GMT ModuleEndJob
---- EventProcessorFailure BEGIN
EventProcessor: an exception occurred during current event processing
---- ScheduleExecutionFailure BEGIN
Path: ProcessingStopped.
---- StdException BEGIN
An exception was thrown while processing module CVNEvaluator/cvneva run: 6210996 subRun: 1 event: 70201
CHECK failed: it != end(): key not found: serving_default
---- StdException END
Exception going through path reco
---- ScheduleExecutionFailure END
---- EventProcessorFailure END
---- FatalRootError BEGIN
Fatal Root Error: TTree::SetEntries
Tree branches have different numbers of entries, eg EventAuxiliary has 0 entries while sim::OpDetDivRecs_opdigi__detsim. has 200 entries.
ROOT severity: 2000
---- FatalRootError END
%MSG
Art has completed and will exit with status 1.
=== End last 100 lines of lar log file ===
RootOutput-a417-6657-118b-f5c3.root
all-input-dids.txt
atmnu_max_weighted_randompolicy_dune10kt_1x2x6_6210996_351_20231121T150122Z_gen_g4_detsim_hitreco__20240507T181420Z_reco2_reco_2024-11-23T_054658Z.log
debugprod.log
jobscript.log
reco2_hist.root
MyPandoraSettings_Master_Atmos_DUNEFD.xml
MyPandoraSettings_Master_DUNEFD.xml
build_slf7.x86_64
localProducts_larsoft_v09_91_02_e26_prof
setup_env-testreco.sh
srcs
temp.txt
temp2.txt
test
work 